Skip to content

skip tests if missing suggested package ncdf4 #25

skip tests if missing suggested package ncdf4

skip tests if missing suggested package ncdf4 #25

Workflow file for this run

on:
push:
branches:
- main
pull_request:
branches:
- main
name: R-CMD-check
jobs:
R-CMD-check:
runs-on: ubuntu-20.04
env:
R_REMOTES_NO_ERRORS_FROM_WARNINGS: true
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
_R_CHECK_TESTS_NLINES_: 0
steps:
- uses: actions/checkout@v2
- uses: r-lib/actions/setup-r@v1
- name: Query dependencies
run: |
install.packages('remotes')
saveRDS(remotes::dev_package_deps(dependencies = TRUE), ".github/depends.Rds", version = 2)
writeLines(sprintf("R-%i.%i", getRversion()$major, getRversion()$minor), ".github/R-version")
shell: Rscript {0}
- name: Cache R packages
if: runner.os != 'Windows'
uses: actions/cache@v2
with:
path: ${{ env.R_LIBS_USER }}
key: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-${{ hashFiles('.github/depends.Rds') }}
restore-keys: ${{ runner.os }}-${{ hashFiles('.github/R-version') }}-1-
- name: Install system dependencies
if: runner.os == 'Linux'
env:
RHUB_PLATFORM: linux-x86_64-ubuntu-gcc
run: |
Rscript -e "remotes::install_github('r-hub/sysreqs')"
sysreqs=$(Rscript -e "cat(sysreqs::sysreq_commands('DESCRIPTION'))")
sudo -s eval "$sysreqs"
- name: Install dependencies
run: |
install.packages(c("remotes"))
remotes::install_deps(dependencies = TRUE)
remotes::install_cran("rcmdcheck")
remotes::install_cran("covr")
shell: Rscript {0}
- name: Check
run: rcmdcheck::rcmdcheck(args = c("--ignore-vignettes", "--no-manual"), build_args = c("--no-build-vignettes"), error_on = "error", check_dir = "check")
shell: Rscript {0}
- name: Upload check results
if: failure()
uses: actions/upload-artifact@v3
with:
name: results
path: check
- name: Test coverage
run: covr::codecov()
shell: Rscript {0}