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@d3b-center

D3b

Center for Data Driven Discovery in Biomedicine at the Children's Hospital of Philadelphia

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  1. bixtools bixtools Public

    🐳 Dockerfiles for bioinformatics tools

    Dockerfile 14 4

  2. d3b-cli-igor d3b-cli-igor Public

    All-purpose CLI tool for D3b Center and partner orgs

    Python

Repositories

Showing 10 of 137 repositories
  • pbta-splicing Public

    Splicing analysis across the PBTA

    d3b-center/pbta-splicing’s past year of commit activity
    HTML 1 0 2 3 Updated Sep 19, 2024
  • d3b-cli-igor Public

    All-purpose CLI tool for D3b Center and partner orgs

    d3b-center/d3b-cli-igor’s past year of commit activity
    Python 0 0 1 1 Updated Sep 19, 2024
  • d3b_cbtn_summit Public
    d3b-center/d3b_cbtn_summit’s past year of commit activity
    R 0 Apache-2.0 0 0 0 Updated Sep 19, 2024
  • d3b-dev-rnaseq-snv Public

    RNAseq SNV Calling Workflow (beta). This workflow follows the COV-IRT NASA-developed pipeline, with the exception of joint genotyping-specific params and steps.

    d3b-center/d3b-dev-rnaseq-snv’s past year of commit activity
    Jupyter Notebook 0 Apache-2.0 2 0 1 Updated Sep 18, 2024
  • OpenPedCan-analysis Public Forked from AlexsLemonade/OpenPBTA-analysis

    The analysis repository for the Open Pediatric Cancer Project

    d3b-center/OpenPedCan-analysis’s past year of commit activity
    HTML 15 67 26 4 Updated Sep 18, 2024
  • Playbook-Workflow-Builder Public Forked from MaayanLab/Playbook-Workflow-Builder

    A repository for the Playbook Workflow Builder project.

    d3b-center/Playbook-Workflow-Builder’s past year of commit activity
    TypeScript 0 17 0 0 Updated Sep 18, 2024
  • d3b-dff-cli Public

    the command line tool code base for d3b data file foundation

    d3b-center/d3b-dff-cli’s past year of commit activity
    Python 0 Apache-2.0 0 0 1 Updated Sep 16, 2024
  • pbta-ancestry Public
    d3b-center/pbta-ancestry’s past year of commit activity
    HTML 1 BSD-2-Clause 0 1 1 Updated Sep 12, 2024
  • hope-cohort-analysis Public

    Analysis for HOPE cohort

    d3b-center/hope-cohort-analysis’s past year of commit activity
    HTML 3 1 4 9 Updated Sep 9, 2024
  • OpenPedCan-manuscript Public

    The manuscript repository for the Pediatric Open Targets Project

    d3b-center/OpenPedCan-manuscript’s past year of commit activity
    HTML 2 3 0 0 Updated Sep 6, 2024
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