Add IN Carta preset and related compatibility changes + testing

[d33bs]

Description

This PR adds a preset for use with IN Carta data, some related compatibility changes for use with this preset, and a test which demonstrates the use of this preset and the changes for #136 .

As part of this work, I also opted to update the pre-commit check versions.

What is the nature of your change?

• Bug fix (fixes an issue).
• Enhancement (adds functionality).
• Breaking change (fix or feature that would cause existing functionality to not work as expected).
• This change requires a documentation update.

Checklist

Please ensure that all boxes are checked before indicating that a pull request is ready for review.

• I have read the CONTRIBUTING.md guidelines.
• My code follows the style guidelines of this project.
• I have performed a self-review of my own code.
• I have commented my code, particularly in hard-to-understand areas.
• I have made corresponding changes to the documentation.
• My changes generate no new warnings.
• New and existing unit tests pass locally with my changes.
• I have added tests that prove my fix is effective or that my feature works.
• I have deleted all non-relevant text in this pull request template.

[gwaybio]

🎉

Mostly minor comments - one discussion on development design is probably needed (switching to an in-carta-dev branch prior to merging to main).

[d33bs]

Thank you @gwaybio for the comments and review! Merging this in and kicking off a patch release.