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edited Dockerfile to point to master repo
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liuming1997 committed Jan 9, 2024
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2 changes: 1 addition & 1 deletion Dockerfile
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Expand Up @@ -42,7 +42,7 @@ RUN R -e "BiocManager::install('scRNAseq')"
RUN R -e "BiocManager::install('celda')"
#RUN R -e "devtools::install_github('wleepang/shiny-directory-input')"
RUN R -e "options(timeout=360000)" \
&& R -e "devtools::install_github('compbiomed/singleCellTK@v2.10.1', force = TRUE, dependencies = TRUE)"
&& R -e "devtools::install_github('compbiomed/singleCellTK', force = TRUE, dependencies = TRUE)"

RUN R -e "install.packages('reticulate')"
RUN R -e "Sys.setenv(RETICULATE_PYTHON = '/usr/bin/python3')"
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