Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

Containerize missing tools/update #289

Merged
merged 8 commits into from
Dec 31, 2024
Merged

Containerize missing tools/update #289

merged 8 commits into from
Dec 31, 2024

Conversation

espenhgn
Copy link
Contributor

@espenhgn espenhgn commented Dec 31, 2024 •
edited
Loading

Fixes #285
Fixes #286

Changes proposed in this pull request:

  • Adds R packages AER, MendelianRandomization, gwasurvivr
  • Pull rocker/verse image from ghcr.io
  • use posit/bioconda packages from 2024.09.04 (from 2024.09.01)

Before submitting

  • I've read and followed all steps in the Making a pull request
    section of the CONTRIBUTING docs.
  • I've updated or added any relevant documentation and docstrings where appropriate in the codebase.
  • If this PR fixes a bug, I've added a test that will fail without my fix.
  • If this PR adds a new feature, I've added tests that sufficiently cover my new functionality.

@espenhgn espenhgn added the enhancement New feature or request label Dec 31, 2024
@espenhgn espenhgn merged commit 89ffdf4 into main Dec 31, 2024
10 checks passed
@espenhgn espenhgn deleted the espenhgn/issue285 branch December 31, 2024 11:04
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Reviewers
No reviews
Assignees
No one assigned
Labels
enhancement New feature or request
Projects
None yet
Milestone
No milestone
Development

Successfully merging this pull request may close these issues.

Install gwasurvivr to R.sif Containerize missing tools/update
1 participant
@espenhgn