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Parameterized RMarkdown report with a complex YAML header

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Example Complex YAML

This R Markdown report has a complex YAML header that grabs options from a static file.

A few caveats when deployed to RStudio Connect:

  • You cannot use relative paths to reference resources deployed with RStudio Connect
  • Absolute system paths to available resources, as well as links to static URLs / etc. are welcome
  • Related, environment variables (including secrets managed in RStudio Connect) can be passed (see TESTVAR) from the parent process
  • Package dependencies are not parsed in the YAML header, so you need to add the package to a library("packagename") elsewhere in a R code chunk in order for the dependency to be recognized

Aside from these caveats, you can use any code you want in that section! A few ideas for your exploration:

# get a record from a table
!expr mycon <- DBI::dbConnect(odbc::odbc(), "My DSN"); DBI::dbGetQuery(mycon, "mytable")$mycolumn

# get a pin
!expr pins::board_register_rsconnect(name = "myrsc"); pin_get("sales-by-baths", board = "myrsc")$mycolumn

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