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CERR (pronounced 'sir'), stands for Computational Environment for Radiological Research. CERR is MATLAB based software platform for developing and sharing research results using radiation therapy treatment planning and imaging informatics. CERR has a wide variety of dose, imaging, and structure analysis and comparison tools. CERR is open-source and GNU GPL copyrighted.

Installing

• Source Code (requires Matlab license)
• Compiled Version (Does not require Matlab license)

Sample Datasets

• H&N, Prostate, Lung, Orart

Community/Support

• CERR Google group

Tutorials

• Data import
  • Importing DICOM
  • Importing Mha
  • Importing NIfTI data
  • Vendor Specific data
• Coordinate system
• Data Structure (the planC object)
• Directory Structure for the source code
• Viewer
• Editing Dose distributions
• Editing Scans
• Contouring tools
• Editing Structures
• Dose Volume Histograms
• Radiomics
• Texture Calculation
• Command Line Tools
• IMRTP: Intensity Modulated Radiation Therapy Planning
• Metrics
• Merging Plans
• Image Fusion
• Batch Scripts for Import and DVH extraction for various outcomes analysis projects
• Model Implementation Library
  • Dosimetric models
• ROE: Radiotherapy Outcomes Explorer
• Miscellaneous
• GUI-based metrics extraction and cohort visualization
• Unit Testing
• Code-modification log