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Move our Tools repo under datahub #1771

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rmadupuri opened this issue Feb 15, 2023 · 0 comments
Closed
9 tasks

Move our Tools repo under datahub #1771

rmadupuri opened this issue Feb 15, 2023 · 0 comments

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@rmadupuri
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Please keep this checklist for curation of a new study.

  • create an issue on datahub before curating a study (one issue per study) and copy this checklist to the issue tracker
  • List information of the dataset/paper in the issue, e.g. pmid, paper link, suppl file link
  • Document the curation process, e.g. how and by whom the data was transformed
  • Follow the data checklist
  • Create a pull request to datahub once the data is curated
  • Push to triage portal
  • Import into msk and public portal database
  • Update the default quick select study list see options for selecting tcga + non-tcga studies cbioportal#5831 (only for studies that are not overlapping with existing ones; only for human tumors, not cell lines)
  • Update cBioPortal news
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