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130 Open 631 Closed
130 Open 631 Closed
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Issues list

Identifying samples previously annotated as germline-mutant support
#2124 opened Dec 31, 2024 by nehawali21
Mistakes in copy number variation of CCLE 2019 support
#2123 opened Nov 14, 2024 by keremw
1
Possible errant SV data support
#2127 opened Nov 7, 2024 by alisman
1
user request for new study: Huang, C. et al. Proteogenomic insights into the biology and treatment of HPV-negative head and neck squamous cell carcinoma.
#2091 opened Oct 29, 2024 by tmazor
AACR GENIE v16.0 support
#2126 opened Oct 23, 2024 by fritzparl
Data issue for study: coadread_cass_2020
#2081 opened Sep 30, 2024 by jmtang2018
2
All studies in crdc/gdc Failed to validate
#2080 opened Sep 30, 2024 by jmtang2018
1
TCGA mRNA microarray preprocessing procedure (mrna_agilent_microarray) support
#2125 opened Sep 23, 2024 by lovenicole
Missing data from latest study release emailed-author Data missing for curation; contacted author missing-data
#2070 opened Sep 11, 2024 by Rima-Waleed
1 of 5 tasks
Data issue for study: mbn_sfu_2023
#2056 opened Aug 26, 2024 by saxenanurag
2
Data issue for study: crc_hta11_htan_2021
#2055 opened Aug 26, 2024 by saxenanurag
1
Data issue for study: coadread_cass_2020
#2054 opened Aug 26, 2024 by saxenanurag
4
Nunes, Luis et al. Prognostic genome and transcriptome signatures in colorectal cancers. Nature 2024 emailed-author Data missing for curation; contacted author
#2051 opened Aug 8, 2024 by LuisAlbertoSantosNunes
9 tasks
1
TCGA ovarian cancer case list for cases with mutation data seems to be incorrect
#2036 opened Jun 4, 2024 by schultzn
@ritikakundra
Update current study nst_nfosi_ntap with new samples, data
#2034 opened May 22, 2024 by anngvu
9 tasks
1
Guidelines for Pancreatic Cancer Dataset
#2026 opened May 1, 2024 by mohammadhssn
Current validateStudies script is not called on CircleCI test
#2013 opened Feb 27, 2024 by inodb
Add IDC OHIF viewers for CT scans in TCGA tcga
#2011 opened Feb 27, 2024 by inodb
Missing and incorrect gene data in MAF files
#2122 opened Jan 21, 2024 by marcus-r-kelly
@sbabyanusha
3
Structural variant data formatting
#1987 opened Dec 22, 2023 by inodb
Improvements to Urothelial Carcinoma (BCAN/HCRN, Nat Commun 2022) study
#1986 opened Dec 20, 2023 by rmadupuri
Metabric version problem
#1968 opened Nov 16, 2023 by jeitziner
4
study view add arm-level CNA chart in TCGA shows ancestry data
#2119 opened Nov 10, 2023 by inodb
3
Study gbm_cptac_2021 cannot be imported in the portal due to new entity_id restrictions
#1960 opened Oct 30, 2023 by MatthijsPon
Streamline Data Validation Process with Automated Staging Environment
#1908 opened Sep 11, 2023 by justinjao
1
ProTip! Updated in the last three days: updated:>2025-01-12.