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update dnanexus default kraken2 db #80

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merged 3 commits into from
May 20, 2020
Merged

update dnanexus default kraken2 db #80

merged 3 commits into from
May 20, 2020

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dpark01
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@dpark01 dpark01 commented May 20, 2020

This updates the default kraken2 database in DNAnexus to use Simon's latest custom build which forces artificial sequence taxa to always win against bacteria instead of going through standard LCA.

@dpark01 dpark01 merged commit 65df84f into master May 20, 2020
@dpark01 dpark01 deleted the dp-metagenomics branch May 21, 2020 13:36
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