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bump upstream docker images #556

Merged
merged 10 commits into from
Sep 23, 2024
Merged

bump upstream docker images #556

merged 10 commits into from
Sep 23, 2024

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dpark01
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@dpark01 dpark01 commented Sep 18, 2024

Bump docker image tags:

  • viral-core 2.3.2 to 2.3.6
  • viral-assemble 2.3.2.0 to 2.3.6.1
  • viral-phylo 2.1.20.2 to 2.3.6.0
  • update task lofreq to use viral-phylo instead of biocontainers
    This addresses a bug with assembling genomes where the sample name contains whitespace (as is the convention for Genbank)

@dpark01 dpark01 merged commit cc8a4b7 into master Sep 23, 2024
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@dpark01 dpark01 deleted the dp-bump-core branch September 23, 2024 12:34
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