Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

allow additional options for picard in FastqToUBAM #518

Merged
merged 2 commits into from
Feb 23, 2024

Conversation

tomkinsc
Copy link
Member

allow additional options for picard in the FastqToUBAM task via a new additional_picard_option_string input that's passed to picard directly if set

via a new additional_picard_option_string input that's passed to picard directly if set
rename input to additional_picard_options to be more consistent with the naming of inputs in other tasks where we allow the user to pass in arbitrary arg strings
@tomkinsc tomkinsc merged commit 370ec84 into master Feb 23, 2024
12 checks passed
@tomkinsc tomkinsc deleted the ct-expose-fq-to-bam-qual-param branch February 23, 2024 04:08
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

Successfully merging this pull request may close these issues.

1 participant