Merge pull request #100 from broadinstitute/dp-demux

illumina_demux: append flowcell and lane to filenames
broadinstitute · Jun 10, 2020 · 77e07c0 · 77e07c0
2 parents c586b57 + 2b4016f
commit 77e07c0
Showing 1 changed file with 1 addition and 0 deletions.
diff --git a/pipes/WDL/tasks/tasks_demux.wdl b/pipes/WDL/tasks/tasks_demux.wdl
@@ -194,6 +194,7 @@ task illumina_demux {
       --JVMmemory="$mem_in_mb"m \
       $demux_threads \
       ${true='--force_gc=true' false="--force_gc=false" forceGC} \
+      --append_run_id \
       --compression_level=5 \
       --loglevel=DEBUG