Merge pull request #120 from broadinstitute/dp-classify

kraken2 build wdl bugfix
broadinstitute · Jun 18, 2020 · 33d2a3b · 33d2a3b
2 parents c47263f + d4c1563
commit 33d2a3b
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/pipes/WDL/tasks/tasks_metagenomics.wdl b/pipes/WDL/tasks/tasks_metagenomics.wdl
@@ -421,7 +421,7 @@ task build_kraken2_db {
       ${'--kmerLen=' + kmerLen} \
       ${'--minimizerLen=' + minimizerLen} \
       ${'--minimizerSpaces=' + minimizerSpaces} \
-      ${'--maxDbSize=' + maxDbSize}
+      ${'--maxDbSize=' + maxDbSize} \
       --loglevel=DEBUG
     tar -c -C $DB_DIR . | zstd ${"-" + zstd_compression_level} > "kraken2-${db_basename}.tar.zst" &