Merge pull request #16 from broadinstitute/ct-fastqc-kwarg-fix

kwarg fix in fastqc threads sanitization
broadinstitute · Apr 13, 2020 · de5c4fb · de5c4fb
2 parents 2a4ec3e + 5a86333
commit de5c4fb
Showing 1 changed file with 1 addition and 1 deletion.
diff --git a/tools/fastqc.py b/tools/fastqc.py
@@ -30,7 +30,7 @@ def version(self):
         return TOOL_VERSION
 
     def execute(self, inBam, out_html, out_zip=None, threads=None):    # pylint: disable=W0221
-        threads =  util.misc.sanitize_thread_count(threads)
+        threads =  util.misc.sanitize_thread_count(threads=threads)
 
         if tools.samtools.SamtoolsTool().isEmpty(inBam):
             # fastqc can't deal with empty input