Update htsjdk to 3.0.1 #1831
Merged
Update htsjdk to 3.0.1 #1831
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
|
@droazen PR to update htsjdk to 3.0.1. |
* upgrade htsjdk to 3.0.1 and replace use of a newly deprecated method
lbergelson
force-pushed
the
lb_update_htsjdk
branch
from
0cd8471 to
8fb02a9
Compare
|
@lbergelson Looks like there are a bunch of test failures here related to changes from the new HTSJDK release... |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Checklist (never delete this)
Never delete this, it is our record that procedure was followed. If you find that for whatever reason one of the checklist points doesn't apply to your PR, you can leave it unchecked but please add an explanation below.
Content
- [ ] Added or modified tests to cover changes and any new functionality- [ ] Edited the README / documentation (if applicable)Review
For more detailed guidelines, see https://github.com/broadinstitute/picard/wiki/Guidelines-for-pull-requests