Update CheckFingerprint

broadinstitute · Nov 22, 2019 · 949c533 · 949c533
1 parent 8d7b0b6
commit 949c533
Showing 1 changed file with 2 additions and 3 deletions.
diff --git a/src/main/java/picard/fingerprint/CheckFingerprint.java b/src/main/java/picard/fingerprint/CheckFingerprint.java
@@ -210,8 +210,8 @@ public class CheckFingerprint extends CommandLineProgram {
 
     private final Log log = Log.getInstance(CheckFingerprint.class);
 
-    public static final String FINGERPRINT_SUMMARY_FILE_SUFFIX = "fingerprinting_summary_metrics";
-    public static final String FINGERPRINT_DETAIL_FILE_SUFFIX = "fingerprinting_detail_metrics";
+    public static final String FINGERPRINT_SUMMARY_FILE_SUFFIX = ".fingerprinting_summary_metrics";
+    public static final String FINGERPRINT_DETAIL_FILE_SUFFIX = ".fingerprinting_detail_metrics";
 
     private Path inputPath;
     private Path genotypesPath;
@@ -223,7 +223,6 @@ protected int doWork() {
             outputDetailMetricsFile = DETAIL_OUTPUT;
             outputSummaryMetricsFile = SUMMARY_OUTPUT;
         } else {
-            OUTPUT += ".";
             outputDetailMetricsFile = new File(OUTPUT + FINGERPRINT_DETAIL_FILE_SUFFIX);
             outputSummaryMetricsFile = new File(OUTPUT + FINGERPRINT_SUMMARY_FILE_SUFFIX);
         }