depmap_omics_upload

This repo contains a Python module for various DepMap post-workflow processing steps.

Installation

1. Install the required system dependencies:

   • pyenv
   • Poetry

2. Install the required Python version (3.9.18):

   pyenv install "$(cat .python-version)"

3. Confirm that python maps to the correct version:

   python --version
   

4. Set the Poetry interpreter and install the Python dependencies:

   poetry env use "$(pyenv which python)"
   poetry install