Brain-Life wrapper for freesurfer/mri_deface

Installation

git clone git@github.com:brain-life/app-deface.git

Create config.json with something like following content. config.json provides input parameter for this app.

{
    "t1": "/N/u/hayashis/Karst/testdata/app-deface/t1.nii.gz"
}

Running

Run start.sh to kick off your job.