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@bokulich-lab

Laboratory of Food Systems Biotechnology

FSB Lab, Institute of Food, Nutrition, and Health, D-HEST, ETH Zurich

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  1. RESCRIPt RESCRIPt Public

    REference Sequence annotation and CuRatIon Pipeline

    Python 95 26

  2. q2-fondue q2-fondue Public

    Functions for reproducibly Obtaining and Normalizing Data re-Used from Elsewhere

    Python 21 7

  3. q2-assembly q2-assembly Public

    QIIME 2 plugin for (meta)genome assembly.

    Python 4 13

  4. q2-moshpit q2-moshpit Public

    QIIME 2 plugin for functional annotation and taxonomic classification of shotgun metagenomes.

    Python 3 14

Repositories

Showing 10 of 33 repositories
  • q2-assembly Public

    QIIME 2 plugin for (meta)genome assembly.

    bokulich-lab/q2-assembly’s past year of commit activity
    Python 4 BSD-3-Clause 13 8 0 Updated Jan 14, 2025
  • q2-ms Public
    bokulich-lab/q2-ms’s past year of commit activity
    Python 0 BSD-3-Clause 1 4 2 Updated Jan 14, 2025
  • moshpit-docs Public

    MOSHPIT plugin suite documentation

    bokulich-lab/moshpit-docs’s past year of commit activity
    TeX 0 BSD-3-Clause 2 0 0 Updated Jan 14, 2025
  • mishmash Public
    bokulich-lab/mishmash’s past year of commit activity
    Python 1 BSD-3-Clause 1 7 0 Updated Jan 10, 2025
  • q2-virsorter2 Public
    bokulich-lab/q2-virsorter2’s past year of commit activity
    Python 0 BSD-3-Clause 3 0 0 Updated Jan 9, 2025
  • q2-moshpit Public

    QIIME 2 plugin for functional annotation and taxonomic classification of shotgun metagenomes.

    bokulich-lab/q2-moshpit’s past year of commit activity
    Python 3 BSD-3-Clause 14 20 6 Updated Jan 9, 2025
  • q2-fondue Public

    Functions for reproducibly Obtaining and Normalizing Data re-Used from Elsewhere

    bokulich-lab/q2-fondue’s past year of commit activity
    Python 21 BSD-3-Clause 7 11 1 Updated Jan 8, 2025
  • q2-viromics Public
    bokulich-lab/q2-viromics’s past year of commit activity
    Python 0 BSD-3-Clause 4 2 1 Updated Jan 8, 2025
  • MOSHPIT Public

    Provides "mosh" cli command and "moshpit" proxy package.

    bokulich-lab/MOSHPIT’s past year of commit activity
    Python 0 BSD-3-Clause 1 0 0 Updated Jan 7, 2025
  • RESCRIPt Public

    REference Sequence annotation and CuRatIon Pipeline

    bokulich-lab/RESCRIPt’s past year of commit activity
    Python 95 BSD-3-Clause 26 15 1 Updated Jan 4, 2025
View all repositories

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