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read_depth_genotyper

Get genotypes for regions using WSSD and SUNK

Install

git clone https://github.com/bnelsj/read_depth_genotyper --recursive

Genotype

snakesub -j 200 -w 60 -kT get_tables

Plot

snakesub -j 200 -w 60 -kT

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Get genotypes for regions using WSSD and SUNK

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