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refactor: use proper plurals for er indices
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carrascomj committed Jun 21, 2024
1 parent 474dd7e commit eb04ad5
Showing 1 changed file with 4 additions and 4 deletions.
8 changes: 4 additions & 4 deletions maud/getting_stan_inputs.py
Original file line number Diff line number Diff line change
Expand Up @@ -133,7 +133,7 @@ def get_network_properties_input(
metabolite_codes = codify_maud_object(kinetic_model.metabolites)
mic_codes = codify_maud_object(mics)
enzyme_codes = codify_maud_object(enzymes)
ers_codes = codify_maud_object(kinetic_model.ers)
er_codes = codify_maud_object(kinetic_model.ers)
km_ids = parameters.km.ids[0]
km_codes = dict(zip(km_ids, range(1, len(km_ids) + 1)))
if allosteries is not None:
Expand Down Expand Up @@ -178,8 +178,8 @@ def get_network_properties_input(
enzyme_codes[er.enzyme_id] if isinstance(er, EnzymeReaction) else 0
for er in edges
]
edge_ers_code = [
ers_codes[er.id] if isinstance(er, EnzymeReaction) else 0
edge_er_codes = [
er_codes[er.id] if isinstance(er, EnzymeReaction) else 0
for er in edges
]
edge_drain_code = [
Expand Down Expand Up @@ -361,7 +361,7 @@ def get_network_properties_input(
"ci_mic_ix": ci_mic_codes,
"edge_type": edge_mechanism_code,
"edge_to_enzyme": edge_enzyme_code,
"edge_to_er": edge_ers_code,
"edge_to_er": edge_er_codes,
"edge_to_tc": edge_tc_code,
"edge_to_drain": edge_drain_code,
"edge_to_reaction": edge_reaction_code,
Expand Down

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