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Issues: bioinfologics/w2rap-contigger

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Issues list

step2 crashed

#56 opened Dec 2, 2022 by yuzhenpeng

help with compiling on Mac OS

#51 opened Mar 23, 2021 by devonorourke

More details on w2rap-contigger step 5 needed - run with 100bp PE short reads (Illumina)

#48 opened Sep 2, 2020 by wul88

Segmentation fault in Step 5

#46 opened Aug 18, 2020 by theaidenlab

Installation error

#45 opened Jun 11, 2020 by vtrinca

errors when compiling with gcc-8 in MacOS Fixed on next release (needs test) WIP

#41 opened Apr 13, 2019 by bjclavijo w2rap-contigger v1.0

Having trouble with preoccupied kmers Fixed on next release (needs test)

#39 opened Feb 19, 2019 by gitcruz w2rap-contigger v1.0

Illegal involution value WIP

#34 opened Dec 25, 2017 by sanjitsbatra w2rap-contigger v1.0

fails to compile with gcc 7.2.0 Fixed on next release (needs test)

#31 opened Nov 27, 2017 by wookietreiber w2rap-contigger v1.0

Consider enabling disk batches by default Fixed on next release (needs test) WIP

#18 opened Nov 26, 2016 by bjclavijo w2rap-contigger v1.0

Eliminate all data exchange via disk-files in the later stages Fixed on next release (needs test) WIP

#17 opened Nov 26, 2016 by bjclavijo w2rap-contigger v1.0

Rename output files to meaningful names Fixed on next release (needs test)

#16 opened Nov 26, 2016 by bjclavijo w2rap-contigger v1.0

Dump final HBV, paths and GFAs consistently WIP

#15 opened Nov 26, 2016 by bjclavijo w2rap-contigger v1.0

Provide a minimum consistent set of options for PathFinder, and enable PathFinder by default WIP

#14 opened Nov 26, 2016 by bjclavijo w2rap-contigger v1.0

Update licensing information Fixed on next release (needs test) WIP

#13 opened Nov 26, 2016 by bjclavijo w2rap-contigger v1.0

Improve CLI log WIP

#12 opened Nov 26, 2016 by bjclavijo w2rap-contigger v1.0

Review and clean up CLI options Fixed on next release (needs test)

#11 opened Nov 26, 2016 by bjclavijo w2rap-contigger v1.0

Please tag a stable release Fixed on next release (needs test)

#6 opened Jul 2, 2016 by sjackman w2rap-contigger v1.0

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