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add AnnoSINE2 recipes #44980

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Dec 29, 2023
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59 changes: 59 additions & 0 deletions recipes/annosine2/meta.yaml
Original file line number Diff line number Diff line change
@@ -0,0 +1,59 @@
{% set name = "annosine2" %}
{% set version = "1.0.4" %}

package:
name: "{{ name|lower }}"
version: "{{ version }}"

source:
url: https://pypi.io/packages/source/{{ name[0] }}/{{ name }}/{{ name }}-{{ version }}.tar.gz
sha256: c9d12adec9875c4a429c6e9da5b76d31c760ef7474635caf742d25592378f34c

build:
number: 0
entry_points:
- annosine2 = AnnoSINE.AnnoSINE_v2:main
script: "{{ PYTHON }} -m pip install . --no-deps --ignore-installed -vvv "
run_exports:
- {{ pin_subpackage('annosine2', max_pin="x") }}
noarch: python

requirements:
host:
- pip
- python
run:
- cycler ==0.10.0
- kiwisolver
- matplotlib-base
- numpy
- pillow
- pyparsing
- python
- python-dateutil
- six
- hmmer ==3.3.1
- minimap2 ==2.26
- nodejs ==18.12.1
- trf ==4.09
- irf ==3.08
- cd-hit ==4.8.1
- repeatmasker ==4.1.2.p1
- seqtk ==1.4


test:
imports:
- AnnoSINE
commands:
- annosine2 --help

about:
home: https://github.com/liaoherui/AnnoSINE
license: MIT
license_family: MIT
summary: AnnoSINE2 - SINE Annotation Tool for Plant and Animal Genomes

extra:
recipe-maintainers:
- liaoherui