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Updated RNAlien to version 1.7.0 #17153

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merged 10 commits into from
Aug 29, 2019
Merged

Updated RNAlien to version 1.7.0 #17153

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cfe9166
Updated RNAlien to version 1.7.0
eggzilla Aug 29, 2019
24c75fb
Removed echo and merged mv to one line
jfallmann Aug 29, 2019
a10dbad
Updated checksum
eggzilla Aug 29, 2019
e5a694d
Merge branch 'alien170' of github.com:eggzilla/bioconda-recipes into …
eggzilla Aug 29, 2019
089c14a
Fixed path
eggzilla Aug 29, 2019
33d1f89
Added debug output
eggzilla Aug 29, 2019
d4700f9
Fix for path
eggzilla Aug 29, 2019
acb766e
creating bin dir
eggzilla Aug 29, 2019
7ee118b
creating bin dir in prefix
eggzilla Aug 29, 2019
7fbe80e
Minor
jfallmann Aug 29, 2019
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6 changes: 2 additions & 4 deletions recipes/rnalien/build.sh
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Original file line number Diff line number Diff line change
@@ -1,10 +1,8 @@
#!/bin/bash
declare -a tools=("RNAlien" "RNAlienStatistics" "cmsearchToBed" "RNAcentralHTTPRequest")
declare -a tools=("RNAlien" "RNAlienStatistics" "cmsearchToBed" "RNAcentralHTTPRequest" "RNAlienScan")
for t in "${tools[@]}"
do
echo "${t}"
mv $t ${PREFIX}/bin/${t}
mv ${PREFIX}/bin/${t} ${PREFIX}/bin/${t}-bin
mv $t ${PREFIX}/bin/${t}-bin
echo -e "#!/bin/bash\nexport SYSTEM_CERTIFICATE_PATH=${PREFIX}/ssl/cacert.pem\n${PREFIX}/bin/${t}-bin \"\$@\"\n" > ${PREFIX}/bin/${t}
chmod 755 ${PREFIX}/bin/${t}
done
5 changes: 3 additions & 2 deletions recipes/rnalien/meta.yaml
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Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
{% set name = "rnalien" %}
{% set version = "1.6.0" %}
{% set sha256 = "c111fe288f76bf1cc43353cab62aa4912c1484ea56aa54602df814d6fafaa74d" %}
{% set version = "1.7.0" %}
{% set sha256 = "b510ed4747cbaa78193a6055dbf6f52286f97d5543924ee7f4557380c2ee075c" %}

package:
name: {{ name }}
Expand Down Expand Up @@ -36,6 +36,7 @@ test:
- RNAlienStatistics --help
- cmsearchToBed --help
- RNAcentralHTTPRequest --help
- RNAlienScan --help

about:
home: http://rna.tbi.univie.ac.at/rnalien/tool
Expand Down