Replace 'which' with test -x to overcome path length issue in which f…

…or centos-7/8
bioconda · Nov 11, 2024 · 97c2371 · 97c2371
1 parent c4c2bff
commit 97c2371
Showing 1 changed file with 5 additions and 5 deletions.
diff --git a/recipes/control-freec/meta.yaml b/recipes/control-freec/meta.yaml
@@ -33,12 +33,12 @@ test:
     - freec
     - freec2bed.pl
     - freec2circos.pl
-    - which get_fasta_lengths.pl
-    - which makeGraph.R
-    - which makeGraph_Chromosome.R
+    - test -x ${PREFIX}/bin/get_fasta_lengths.pl
+    - test -x ${PREFIX}/bin/makeGraph.R
+    - test -x ${PREFIX}/bin/makeGraph_Chromosome.R
     - vcf2snpFreec.pl
-    - which assess_significance.R
-    - which makeGraph2.0.R
+    - test -x ${PREFIX}/bin/assess_significance.R
+    - test -x ${PREFIX}/bin/makeGraph2.0.R
 
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