Code

Increase test coverage#162

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gromdimon merged 24 commits intomainbihealth/auto-acmg:mainfrom 134-increase-test-coveragebihealth/auto-acmg:134-increase-test-coverageCopy head branch name to clipboardAug 12, 2024

+4,579-1,248

Commits

Commits on Aug 7, 2024

• make models json-serializable

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• Unit tests for BP7

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• Unit tests for PM1

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Commits on Aug 8, 2024

• Add filter for warnings in pytest

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• pm2 tests

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• pm2 tests second time

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• pm4 and bp3 tests

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• add skips

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• test pp2 and bp1

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• tests for pp3 and bp4

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• tests for ps1 and pm5

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• seqvar pvs1 tests

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• pvs1 tests

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• tsx -> tx

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Commits on Aug 9, 2024

• integration tests

  

  Dzmitry Hramyka

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• Fix: Re-add files to Git LFS after correcting .gitattributes

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• Skip 2 tests with SplicingPrediction, since mocking doesn't work properly

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• Comment out e2e variants.csv

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• Skip another SplicingPredictioni test

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• Tests for the auto_amcg core class

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• SplicePrediction tests

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• exclude cache and benchmark from codecov

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• additional tests for pvs1

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• try to fix UI SeqRepo errors

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