Fixed samtools reading issue.

bigdatagenomics · Aug 30, 2016 · 74928e6 · 74928e6
1 parent 143fe5c
commit 74928e6
Showing 1 changed file with 0 additions and 1 deletion.
diff --git a/adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala b/adam-core/src/main/scala/org/bdgenomics/adam/rdd/read/AlignmentRecordRDD.scala
@@ -352,7 +352,6 @@ sealed trait AlignmentRecordRDD extends AvroReadGroupGenomicRDD[AlignmentRecord,
 
       // flush and close all the streams
       compressedOut.flush()
-      compressedOut.close()
       os.flush()
       os.close()
     }