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Fix issues with eeg/ieeg/meg datasets. #197

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merged 7 commits into from
Aug 17, 2020
Merged

Fix issues with eeg/ieeg/meg datasets. #197

merged 7 commits into from
Aug 17, 2020

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rwblair
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@rwblair rwblair commented Aug 11, 2020

closes #186

@sappelhoff
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Thanks @rwblair --> I'd say this closes #186 and I edited the OP to make it automatically close that issue upon merge.

@@ -76,5 +76,5 @@ GSR2 GSR n/a
Erg1 MISC n/a
Erg2 MISC n/a
Resp RESP n/a
Plet PPG n/a
Plet PD n/a
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are you sure this is a photodiode @rwblair ? also tagging @arnodelorme to make him aware that the meditation dataset needs an update because the PPG "type" is not a valid type.

What kind of channel was that Arno?

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A PPG is not simply a photodiode. For a PD (as per IEEG specification) I would assume that the channel represents the signal of a photodiode that is attached to the corner of a screen. That is common in clinical iEEG experiments in EMUs (Epilepsy Monitoring Units), where screens used for stimuli are often not precisely calibrated.

Would it not be better to add PPG as an allowed type? I would say that a PPG channel is unambiguous. We also use them often for physio recordings during fMRI sessions.

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I have never used PPG but I am happy to follow your and @arnodelorme's lead here @robertoostenveld

bids-standard/bids-specification#561

A Pull Request is welcome, I'll be on vacation starting from tomorrow though.

@@ -1,119 +1,119 @@
name type units low_cutoff high_cutoff reference group status
1 ECoG µV 300 0.5 intracranial 1 good
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@dorahermes does this dataset need to be updated somewhere? i.e., the "real" dataset? --> just to keep the real data and the examples in sync

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We've only shared the non-BIDS version currently, we plan to put the BIDS data on openneuro. Will make sure to include these updates!

…ents use a photo diode, PPG itself not on the allowed list of types"

This reverts commit b1cab51.
@rwblair rwblair merged commit c8e01b9 into master Aug 17, 2020
@sappelhoff sappelhoff deleted the fix_starEG branch August 24, 2020 10:10
@rwblair rwblair restored the fix_starEG branch September 3, 2020 15:38
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Cleaning up BIDS examples that showcase use of physiological and other continuous recordings
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