prepare update to 0.1.3

bgraedel · Feb 15, 2024 · b93aaca · b93aaca
1 parent 9d720e5
commit b93aaca
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Showing 8 changed files with 28 additions and 31 deletions.
diff --git a/.pre-commit-config.yaml b/.pre-commit-config.yaml
@@ -1,22 +1,17 @@
 repos:
   - repo: https://github.com/pre-commit/pre-commit-hooks
-    rev: v4.4.0
+    rev: v4.5.0
     hooks:
       - id: check-docstring-first
       - id: end-of-file-fixer
       - id: trailing-whitespace
-  - repo: https://github.com/asottile/setup-cfg-fmt
-    rev: v2.4.0
-    hooks:
-      - id: setup-cfg-fmt
-        args: [--include-version-classifiers]
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.0.287
+    rev: v0.2.1
     hooks:
       - id: ruff
         args: [--fix, --line-length=120]
   - repo: https://github.com/PyCQA/flake8
-    rev: 6.1.0
+    rev: 7.0.0
     hooks:
       - id: flake8
   - repo: https://github.com/myint/autoflake
@@ -25,15 +20,15 @@ repos:
       - id: autoflake
         args: ["--in-place", "--remove-all-unused-imports"]
   - repo: https://github.com/PyCQA/isort
-    rev: 5.12.0
+    rev: 5.13.2
     hooks:
       - id: isort
   - repo: https://github.com/psf/black
-    rev: 23.7.0
+    rev: 24.2.0
     hooks:
       - id: black
   - repo: https://github.com/asottile/pyupgrade
-    rev: v3.10.1
+    rev: v3.15.0
     hooks:
       - id: pyupgrade
         args: [--py38-plus, --keep-runtime-typing]
@@ -42,7 +37,7 @@ repos:
     hooks:
       - id: napari-plugin-checks
   - repo: https://github.com/pre-commit/mirrors-mypy
-    rev: v1.5.1
+    rev: v1.8.0
     hooks:
       - id: mypy
         files: "^src/"

diff --git a/setup.cfg b/setup.cfg
@@ -1,6 +1,6 @@
 [metadata]
 name = arcos-gui
-version = 0.1.2
+version = 0.1.3
 description = A napari plugin to detect and visualize collective signaling events
 long_description = file: README.md
 long_description_content_type = text/markdown

diff --git a/src/arcos_gui/__init__.py b/src/arcos_gui/__init__.py
@@ -1,6 +1,6 @@
 """Arcos GUI Plugin for Napari."""
 
-__version__ = "0.1.2"
+__version__ = "0.1.3"
 
 
 from arcos_gui._helper_functions import (

diff --git a/src/arcos_gui/layerutils/__init__.py b/src/arcos_gui/layerutils/__init__.py
@@ -2,7 +2,7 @@
 
 __author__ = """Benjamin Graedel"""
 __email__ = "benjamin.graedel@unibe.ch"
-__version__ = "0.1.2"
+__version__ = "0.1.3"
 
 from arcos_gui.layerutils._layer_maker import Layermaker
 

diff --git a/src/arcos_gui/processing/__init__.py b/src/arcos_gui/processing/__init__.py
@@ -2,7 +2,7 @@
 
 __author__ = """Benjamin Graedel"""
 __email__ = "benjamin.graedel@unibe.ch"
-__version__ = "0.1.2"
+__version__ = "0.1.3"
 
 
 from arcos_gui.processing._arcos_wrapper import BatchProcessor, arcos_worker

diff --git a/src/arcos_gui/processing/_data_storage.py b/src/arcos_gui/processing/_data_storage.py
@@ -65,7 +65,7 @@ def value(self, value: T):
                 f"Value for {self.value_name} must be of type {type(self._value)}"
             )
 
-        self._value = value
+        self._value = cast(T, value)
         self._notify_observers()
 
     def _notify_observers(self):
@@ -536,19 +536,21 @@ def extract_values(obj):
     def import_from_yaml(
         self,
         filepath: str,
-        selected_attributes: Sequence[
-            Literal[
-                "file_name",
-                "columns",
-                "arcos_parameters",
-                "min_max_meas",
-                "point_size",
-                "lut",
-                "output_order",
-                "min_max_tracklenght",
+        selected_attributes: (
+            Sequence[
+                Literal[
+                    "file_name",
+                    "columns",
+                    "arcos_parameters",
+                    "min_max_meas",
+                    "point_size",
+                    "lut",
+                    "output_order",
+                    "min_max_tracklenght",
+                ]
             ]
-        ]
-        | None = None,
+            | None
+        ) = None,
     ):
         """Imports the parameters from a YAML file and updates the attributes of DataStorage class.
 

diff --git a/src/arcos_gui/tools/__init__.py b/src/arcos_gui/tools/__init__.py
@@ -2,7 +2,7 @@
 
 __author__ = """Benjamin Graedel"""
 __email__ = "benjamin.graedel@unibe.ch"
-__version__ = "0.1.2"
+__version__ = "0.1.3"
 
 
 from arcos_gui.tools._config import (

diff --git a/src/arcos_gui/widgets/__init__.py b/src/arcos_gui/widgets/__init__.py
@@ -2,7 +2,7 @@
 
 __author__ = """Benjamin Graedel"""
 __email__ = "benjamin.graedel@unibe.ch"
-__version__ = "0.1.2"
+__version__ = "0.1.3"
 
 from arcos_gui.widgets._arcos_widget import ArcosController
 from arcos_gui.widgets._bottom_bar_widget import BottombarController