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Interpolate at arbitrary points #109

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@ghislainb ghislainb self-assigned this Jun 17, 2024
@ghislainb ghislainb marked this pull request as draft June 17, 2024 12:40
@ghislainb ghislainb linked an issue Jun 17, 2024 that may be closed by this pull request
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Benchmark result

Judge result

Benchmark Report for /home/runner/work/Bcube.jl/Bcube.jl

Job Properties

  • Time of benchmarks:
    • Target: 17 Jun 2024 - 12:48
    • Baseline: 17 Jun 2024 - 12:52
  • Package commits:
    • Target: 428477
    • Baseline: 25de50
  • Julia commits:
    • Target: 48d4fd
    • Baseline: 48d4fd
  • Julia command flags:
    • Target: None
    • Baseline: None
  • Environment variables:
    • Target: None
    • Baseline: None

Results

A ratio greater than 1.0 denotes a possible regression (marked with ❌), while a ratio less
than 1.0 denotes a possible improvement (marked with ✅). Only significant results - results
that indicate possible regressions or improvements - are shown below (thus, an empty table means that all
benchmark results remained invariant between builds).

ID time ratio memory ratio
["assemble", "poisson DG", "a_Γb(u, v)"] 0.95 (5%) ✅ 1.00 (1%)
["assemble", "poisson DG", "l_Γb(v)"] 1.39 (5%) ❌ 1.00 (1%)
["covo", "TriQuad", "explicit_step"] 0.92 (5%) ✅ 1.00 (1%)
["covo", "TriQuad", "integral_volume"] 0.92 (5%) ✅ 1.00 (1%)
["entities", "nnodes"] 1.22 (5%) ❌ 1.00 (1%)

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["assemble", "basic bilinear"]
  • ["assemble", "poisson DG"]
  • ["covo", "Quad"]
  • ["covo", "TriQuad"]
  • ["entities"]
  • ["mesh"]

Julia versioninfo

Target

Julia Version 1.10.4
Commit 48d4fd48430 (2024-06-04 10:41 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1021-azure #22~22.04.1-Ubuntu SMP Tue Apr 30 16:08:18 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  3271 MHz       1867 s          0 s        231 s       5793 s          0 s
       #2  3242 MHz       1967 s          0 s        230 s       5686 s          0 s
       #3  3154 MHz       1882 s          0 s        251 s       5760 s          0 s
       #4  2445 MHz       2051 s          0 s        211 s       5636 s          0 s
  Memory: 15.606502532958984 GB (12362.375 MB free)
  Uptime: 792.67 sec
  Load Avg:  1.06  1.22  0.75
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Baseline

Julia Version 1.10.4
Commit 48d4fd48430 (2024-06-04 10:41 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1021-azure #22~22.04.1-Ubuntu SMP Tue Apr 30 16:08:18 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  3212 MHz       2188 s          0 s        294 s       7369 s          0 s
       #2  2445 MHz       2638 s          0 s        270 s       6937 s          0 s
       #3  3243 MHz       2392 s          0 s        288 s       7175 s          0 s
       #4  3240 MHz       2422 s          0 s        255 s       7182 s          0 s
  Memory: 15.606502532958984 GB (12155.80078125 MB free)
  Uptime: 989.14 sec
  Load Avg:  1.12  1.16  0.83
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Target result

Benchmark Report for /home/runner/work/Bcube.jl/Bcube.jl

Job Properties

  • Time of benchmark: 17 Jun 2024 - 12:48
  • Package commit: 428477
  • Julia commit: 48d4fd
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["assemble", "basic bilinear", "mass matrix"] 15.644 ms (5%) 13.20 MiB (1%) 51
["assemble", "basic bilinear", "stiffness matrix"] 78.590 ms (5%) 13.20 MiB (1%) 51
["assemble", "poisson DG", "AffineFESystem"] 52.156 ms (5%) 71.64 MiB (1%) 17155
["assemble", "poisson DG", "a_Γ(u, v)"] 36.967 ms (5%) 59.32 MiB (1%) 13065
["assemble", "poisson DG", "a_Γb(u, v)"] 7.239 ms (5%) 10.79 MiB (1%) 3163
["assemble", "poisson DG", "a_Ω(u, v)"] 8.079 ms (5%) 308.81 KiB (1%) 29
["assemble", "poisson DG", "l_Γb(v)"] 89.336 μs (5%) 139.38 KiB (1%) 929
["assemble", "poisson DG", "l_Ω(v)"] 12.323 μs (5%) 2.12 KiB (1%) 1
["covo", "Quad", "explicit_step"] 80.844 ms (5%) 34.25 MiB (1%) 4414
["covo", "Quad", "integral_surface"] 51.011 ms (5%)
["covo", "Quad", "integral_volume"] 20.040 ms (5%)
["covo", "TriQuad", "explicit_step"] 370.501 ms (5%) 25.513 ms 348.42 MiB (1%) 1812340
["covo", "TriQuad", "integral_surface"] 271.854 ms (5%) 234.44 MiB (1%) 1424064
["covo", "TriQuad", "integral_volume"] 57.945 ms (5%) 51.71 MiB (1%) 379526
["entities", "edges2nodes"] 1.552 ns (5%)
["entities", "nedges"] 1.552 ns (5%)
["entities", "nnodes"] 3.396 ns (5%)
["entities", "nodes"] 1.552 ns (5%)
["mesh", "todo"] 1.552 ns (5%)

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["assemble", "basic bilinear"]
  • ["assemble", "poisson DG"]
  • ["covo", "Quad"]
  • ["covo", "TriQuad"]
  • ["entities"]
  • ["mesh"]

Julia versioninfo

Julia Version 1.10.4
Commit 48d4fd48430 (2024-06-04 10:41 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1021-azure #22~22.04.1-Ubuntu SMP Tue Apr 30 16:08:18 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  3271 MHz       1867 s          0 s        231 s       5793 s          0 s
       #2  3242 MHz       1967 s          0 s        230 s       5686 s          0 s
       #3  3154 MHz       1882 s          0 s        251 s       5760 s          0 s
       #4  2445 MHz       2051 s          0 s        211 s       5636 s          0 s
  Memory: 15.606502532958984 GB (12362.375 MB free)
  Uptime: 792.67 sec
  Load Avg:  1.06  1.22  0.75
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Baseline result

Benchmark Report for /home/runner/work/Bcube.jl/Bcube.jl

Job Properties

  • Time of benchmark: 17 Jun 2024 - 12:52
  • Package commit: 25de50
  • Julia commit: 48d4fd
  • Julia command flags: None
  • Environment variables: None

Results

Below is a table of this job's results, obtained by running the benchmarks.
The values listed in the ID column have the structure [parent_group, child_group, ..., key], and can be used to
index into the BaseBenchmarks suite to retrieve the corresponding benchmarks.
The percentages accompanying time and memory values in the below table are noise tolerances. The "true"
time/memory value for a given benchmark is expected to fall within this percentage of the reported value.
An empty cell means that the value was zero.

ID time GC time memory allocations
["assemble", "basic bilinear", "mass matrix"] 15.833 ms (5%) 13.20 MiB (1%) 51
["assemble", "basic bilinear", "stiffness matrix"] 81.464 ms (5%) 13.20 MiB (1%) 51
["assemble", "poisson DG", "AffineFESystem"] 54.433 ms (5%) 71.64 MiB (1%) 17155
["assemble", "poisson DG", "a_Γ(u, v)"] 37.844 ms (5%) 59.32 MiB (1%) 13065
["assemble", "poisson DG", "a_Γb(u, v)"] 7.630 ms (5%) 10.79 MiB (1%) 3163
["assemble", "poisson DG", "a_Ω(u, v)"] 7.743 ms (5%) 308.81 KiB (1%) 29
["assemble", "poisson DG", "l_Γb(v)"] 64.480 μs (5%) 139.38 KiB (1%) 929
["assemble", "poisson DG", "l_Ω(v)"] 12.323 μs (5%) 2.12 KiB (1%) 1
["covo", "Quad", "explicit_step"] 81.036 ms (5%) 34.25 MiB (1%) 4414
["covo", "Quad", "integral_surface"] 51.409 ms (5%)
["covo", "Quad", "integral_volume"] 20.126 ms (5%)
["covo", "TriQuad", "explicit_step"] 403.513 ms (5%) 27.801 ms 348.42 MiB (1%) 1812340
["covo", "TriQuad", "integral_surface"] 281.492 ms (5%) 234.44 MiB (1%) 1424064
["covo", "TriQuad", "integral_volume"] 63.292 ms (5%) 51.71 MiB (1%) 379526
["entities", "edges2nodes"] 1.552 ns (5%)
["entities", "nedges"] 1.552 ns (5%)
["entities", "nnodes"] 2.785 ns (5%)
["entities", "nodes"] 1.552 ns (5%)
["mesh", "todo"] 1.552 ns (5%)

Benchmark Group List

Here's a list of all the benchmark groups executed by this job:

  • ["assemble", "basic bilinear"]
  • ["assemble", "poisson DG"]
  • ["covo", "Quad"]
  • ["covo", "TriQuad"]
  • ["entities"]
  • ["mesh"]

Julia versioninfo

Julia Version 1.10.4
Commit 48d4fd48430 (2024-06-04 10:41 UTC)
Build Info:
  Official https://julialang.org/ release
Platform Info:
  OS: Linux (x86_64-linux-gnu)
      Ubuntu 22.04.4 LTS
  uname: Linux 6.5.0-1021-azure #22~22.04.1-Ubuntu SMP Tue Apr 30 16:08:18 UTC 2024 x86_64 x86_64
  CPU: AMD EPYC 7763 64-Core Processor: 
              speed         user         nice          sys         idle          irq
       #1  3212 MHz       2188 s          0 s        294 s       7369 s          0 s
       #2  2445 MHz       2638 s          0 s        270 s       6937 s          0 s
       #3  3243 MHz       2392 s          0 s        288 s       7175 s          0 s
       #4  3240 MHz       2422 s          0 s        255 s       7182 s          0 s
  Memory: 15.606502532958984 GB (12155.80078125 MB free)
  Uptime: 989.14 sec
  Load Avg:  1.12  1.16  0.83
  WORD_SIZE: 64
  LIBM: libopenlibm
  LLVM: libLLVM-15.0.7 (ORCJIT, znver3)
Threads: 1 default, 0 interactive, 1 GC (on 4 virtual cores)

Runtime information

Runtime Info
BLAS #threads 2
BLAS.vendor() lbt
Sys.CPU_THREADS 4

lscpu output:

Architecture:                       x86_64
CPU op-mode(s):                     32-bit, 64-bit
Address sizes:                      48 bits physical, 48 bits virtual
Byte Order:                         Little Endian
CPU(s):                             4
On-line CPU(s) list:                0-3
Vendor ID:                          AuthenticAMD
Model name:                         AMD EPYC 7763 64-Core Processor
CPU family:                         25
Model:                              1
Thread(s) per core:                 2
Core(s) per socket:                 2
Socket(s):                          1
Stepping:                           1
BogoMIPS:                           4890.85
Flags:                              fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush mmx fxsr sse sse2 ht syscall nx mmxext fxsr_opt pdpe1gb rdtscp lm constant_tsc rep_good nopl tsc_reliable nonstop_tsc cpuid extd_apicid aperfmperf pni pclmulqdq ssse3 fma cx16 pcid sse4_1 sse4_2 movbe popcnt aes xsave avx f16c rdrand hypervisor lahf_lm cmp_legacy svm cr8_legacy abm sse4a misalignsse 3dnowprefetch osvw topoext invpcid_single vmmcall fsgsbase bmi1 avx2 smep bmi2 erms invpcid rdseed adx smap clflushopt clwb sha_ni xsaveopt xsavec xgetbv1 xsaves clzero xsaveerptr rdpru arat npt nrip_save tsc_scale vmcb_clean flushbyasid decodeassists pausefilter pfthreshold v_vmsave_vmload umip vaes vpclmulqdq rdpid fsrm
Virtualization:                     AMD-V
Hypervisor vendor:                  Microsoft
Virtualization type:                full
L1d cache:                          64 KiB (2 instances)
L1i cache:                          64 KiB (2 instances)
L2 cache:                           1 MiB (2 instances)
L3 cache:                           32 MiB (1 instance)
NUMA node(s):                       1
NUMA node0 CPU(s):                  0-3
Vulnerability Gather data sampling: Not affected
Vulnerability Itlb multihit:        Not affected
Vulnerability L1tf:                 Not affected
Vulnerability Mds:                  Not affected
Vulnerability Meltdown:             Not affected
Vulnerability Mmio stale data:      Not affected
Vulnerability Retbleed:             Not affected
Vulnerability Spec rstack overflow: Vulnerable: Safe RET, no microcode
Vulnerability Spec store bypass:    Vulnerable
Vulnerability Spectre v1:           Mitigation; usercopy/swapgs barriers and __user pointer sanitization
Vulnerability Spectre v2:           Mitigation; Retpolines; STIBP disabled; RSB filling; PBRSB-eIBRS Not affected; BHI Not affected
Vulnerability Srbds:                Not affected
Vulnerability Tsx async abort:      Not affected
Cpu Property Value
Brand AMD EPYC 7763 64-Core Processor
Vendor :AMD
Architecture :Unknown
Model Family: 0xaf, Model: 0x01, Stepping: 0x01, Type: 0x00
Cores 16 physical cores, 16 logical cores (on executing CPU)
No Hyperthreading hardware capability detected
Clock Frequencies Not supported by CPU
Data Cache Level 1:3 : (32, 512, 32768) kbytes
64 byte cache line size
Address Size 48 bits virtual, 48 bits physical
SIMD 256 bit = 32 byte max. SIMD vector size
Time Stamp Counter TSC is accessible via rdtsc
TSC runs at constant rate (invariant from clock frequency)
Perf. Monitoring Performance Monitoring Counters (PMC) are not supported
Hypervisor Yes, Microsoft

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Benchmark Results

main 4713b06... main/4713b06463100b...
assemble/basic bilinear/mass matrix 16.1 ± 0.37 ms 17 ± 4.1 ms 0.946
assemble/basic bilinear/stiffness matrix 0.08 ± 0.0015 s 0.082 ± 0.0042 s 0.975
assemble/poisson DG/AffineFESystem 0.0539 ± 0.0078 s 0.0528 ± 0.0073 s 1.02
assemble/poisson DG/a_Γ(u, v) 0.0377 ± 0.0057 s 0.0377 ± 0.0054 s 0.999
assemble/poisson DG/a_Γb(u, v) 7.94 ± 0.13 ms 7.33 ± 0.13 ms 1.08
assemble/poisson DG/a_Ω(u, v) 7.79 ± 0.024 ms 7.62 ± 0.034 ms 1.02
assemble/poisson DG/l_Γb(v) 0.122 ± 0.024 ms 0.124 ± 0.021 ms 0.986
assemble/poisson DG/l_Ω(v) 12.7 ± 0.19 μs 12.8 ± 0.38 μs 0.99
covo/Quad/explicit_step 0.081 ± 0.0009 s 0.0808 ± 0.0017 s 1
covo/Quad/integral_surface 0.0529 ± 0.00041 s 0.0513 ± 0.00041 s 1.03
covo/Quad/integral_volume 20.5 ± 0.09 ms 20.5 ± 0.086 ms 1
covo/TriQuad/explicit_step 0.402 ± 0.019 s 0.409 ± 0.018 s 0.984
covo/TriQuad/integral_surface 0.303 ± 0.0037 s 0.315 ± 0.0057 s 0.962
covo/TriQuad/integral_volume 0.0781 ± 0.0038 s 0.0766 ± 0.0038 s 1.02
entities/edges2nodes 1.56 ± 0.01 ns 1.55 ± 0.01 ns 1.01
entities/nedges 1.56 ± 0.01 ns 1.55 ± 0.01 ns 1.01
entities/nnodes 2.79 ± 0.001 ns 3.11 ± 0.003 ns 0.9
entities/nodes 1.55 ± 0.01 ns 1.55 ± 0.01 ns 0.999
mesh/todo 2.48 ± 0.001 ns 1.55 ± 0.01 ns 1.59
time_to_load 3.23 ± 0.044 s 3.25 ± 0.032 s 0.996

Benchmark Plots

A plot of the benchmark results have been uploaded as an artifact to the workflow run for this PR.
Go to "Actions"->"Benchmark a pull request"->[the most recent run]->"Artifacts" (at the bottom).

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Evaluate AbstractLazy on arbitrary points
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