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Issues list

Bias if I use directly a transcriptome fasta file in the strata object?
#33 opened Jul 24, 2024 by LPioL
Issue with strata_uniprot_pfam_map- no applicable method for 'mutate'
#32 opened Jul 4, 2024 by mbarkdull
Error in sql_integer_list(x) when trying strata_convert()
#31 opened Apr 24, 2024 by wolfylair
1
"ncbi_tree" function error: Error in x$id : $ operator is invalid for atomic vectors
#30 opened Aug 21, 2023 by minzooey
1
Error: The focal species is not present in UniProt
#29 opened Aug 4, 2023 by CWYuan08
3
Error in if (class(strata) != "Strata") { : the condition has length > 1
#28 opened Feb 9, 2023 by Dabaixian
1
Error in (function (fastafile, blastdb = "blastdb", verbose = FALSE) : Failed to make blast database blastdb/Araport11_genes.201606.pep.fasta In addition: Warning message: In system2("makeblastdb", stderr = TRUE, stdout = TRUE, args = c("-dbtype", : running command '"makeblastdb" -dbtype prot -in Araport11_genes.201606.pep.fasta -out blastdb/Araport11_genes.201606.pep.fasta' had status 1
#27 opened Nov 9, 2022 by xuezhang335
10
May I use Phylostratr to study the genomic phylostratigraphy of Mycobacterium tuberculosis?
#24 opened Jul 6, 2022 by TaoCheng98
Error when importing external blast results
#23 opened Nov 25, 2021 by fka21
strata_blast issue, similar to #15
#22 opened Nov 16, 2021 by GavinLu42
Duplicated factor levels while calling stratify()
#21 opened Oct 12, 2020 by fka21
No alias or index file found
#20 opened Aug 11, 2020 by paolacornejo
BLAST Database error
#17 opened Jul 9, 2020 by maxnest
3
Issues in compiling results
#12 opened Sep 4, 2019 by priyanka8590
Invalid Strata object
#10 opened Jul 22, 2019 by champ52018
8
Heatmap layout bug
#8 opened Feb 6, 2019 by Piergiorge
8
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