[SEDONA-228] Standardize logging modules

common/pom.xml

@@ -33,6 +33,10 @@
     <packaging>jar</packaging>
 
     <dependencies>
+        <dependency>
+            <groupId>org.apache.logging.log4j</groupId>
+            <artifactId>log4j-1.2-api</artifactId>
+        </dependency>
         <dependency>
             <groupId>org.geotools</groupId>
             <artifactId>gt-main</artifactId>

common/src/test/resources/log4j2.properties

@@ -0,0 +1,27 @@
+#
+# Licensed to the Apache Software Foundation (ASF) under one or more
+# contributor license agreements.  See the NOTICE file distributed with
+# this work for additional information regarding copyright ownership.
+# The ASF licenses this file to You under the Apache License, Version 2.0
+# (the "License"); you may not use this file except in compliance with
+# the License.  You may obtain a copy of the License at
+#
+#    http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+
+# Set everything to be logged to the file target/unit-tests.log
+rootLogger.level = info
+rootLogger.appenderRef.file.ref = File
+
+appender.file.type = File
+appender.file.name = File
+appender.file.fileName = target/unit-tests.log
+appender.file.append = true
+appender.file.layout.type = PatternLayout
+appender.file.layout.pattern = %d{yy/MM/dd HH:mm:ss.SSS} %t %p %c{1}: %m%n%ex

core/pom.xml

@@ -77,6 +77,10 @@
             <groupId>org.apache.hadoop</groupId>
             <artifactId>hadoop-client</artifactId>
         </dependency>
+        <dependency>
+            <groupId>org.apache.logging.log4j</groupId>
+            <artifactId>log4j-1.2-api</artifactId>
+        </dependency>
         <dependency>
             <groupId>edu.ucar</groupId>
             <artifactId>cdm-core</artifactId>
@@ -130,6 +134,20 @@
             <artifactId>hadoop-minicluster</artifactId>
             <version>${hadoop.version}</version>
             <scope>test</scope>
+            <exclusions>
+                <exclusion>
+                    <groupId>log4j</groupId>
+                    <artifactId>log4j</artifactId>
+                </exclusion>
+                <exclusion>
+                    <groupId>ch.qos.reload4j</groupId>
+                    <artifactId>reload4j</artifactId>
+                </exclusion>
+                <exclusion>
+                    <groupId>org.slf4j</groupId>
+                    <artifactId>*</artifactId>
+                </exclusion>
+            </exclusions>
         </dependency>
         <dependency>
             <groupId>org.mockito</groupId>

core/src/test/resources/log4j2.properties

@@ -0,0 +1,31 @@
+#
+# Licensed to the Apache Software Foundation (ASF) under one or more
+# contributor license agreements.  See the NOTICE file distributed with
+# this work for additional information regarding copyright ownership.
+# The ASF licenses this file to You under the Apache License, Version 2.0
+# (the "License"); you may not use this file except in compliance with
+# the License.  You may obtain a copy of the License at
+#
+#    http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+
+# Set everything to be logged to the file target/unit-tests.log
+rootLogger.level = info
+rootLogger.appenderRef.file.ref = File
+
+appender.file.type = File
+appender.file.name = File
+appender.file.fileName = target/unit-tests.log
+appender.file.append = true
+appender.file.layout.type = PatternLayout
+appender.file.layout.pattern = %d{yy/MM/dd HH:mm:ss.SSS} %t %p %c{1}: %m%n%ex
+
+# Ignore messages below warning level from Jetty, because it's a bit verbose
+logger.jetty.name = org.sparkproject.jetty
+logger.jetty.level = warn

flink/pom.xml

@@ -135,9 +135,8 @@
             <artifactId>scalatest_${scala.compat.version}</artifactId>
         </dependency>
         <dependency>
-            <groupId>ch.qos.reload4j</groupId>
-            <artifactId>reload4j</artifactId>
-            <version>1.2.21</version>
+            <groupId>org.apache.logging.log4j</groupId>
+            <artifactId>log4j-1.2-api</artifactId>
             <scope>test</scope>
         </dependency>
         <dependency>

flink/src/test/java/org/apache/sedona/flink/TestBase.java

@@ -25,8 +25,6 @@
 import org.apache.flink.table.api.bridge.java.StreamTableEnvironment;
 import org.apache.flink.types.Row;
 import org.apache.flink.util.CloseableIterator;
-import org.apache.log4j.Level;
-import org.apache.log4j.Logger;
 import org.apache.sedona.flink.expressions.Constructors;
 import org.locationtech.jts.geom.*;
 import org.wololo.jts2geojson.GeoJSONWriter;
@@ -62,7 +60,6 @@ static void initialize() {
     }
 
     static void initialize(boolean enableWebUI) {
-        Logger.getLogger("org").setLevel(Level.WARN);
         env = enableWebUI? StreamExecutionEnvironment.createLocalEnvironmentWithWebUI(new Configuration()):
                 StreamExecutionEnvironment.getExecutionEnvironment();
         EnvironmentSettings settings = EnvironmentSettings.newInstance().inStreamingMode().build();

flink/src/test/resources/log4j2.properties

@@ -0,0 +1,27 @@
+#
+# Licensed to the Apache Software Foundation (ASF) under one or more
+# contributor license agreements.  See the NOTICE file distributed with
+# this work for additional information regarding copyright ownership.
+# The ASF licenses this file to You under the Apache License, Version 2.0
+# (the "License"); you may not use this file except in compliance with
+# the License.  You may obtain a copy of the License at
+#
+#    http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+
+# Set everything to be logged to the file target/unit-tests.log
+rootLogger.level = info
+rootLogger.appenderRef.file.ref = File
+
+appender.file.type = File
+appender.file.name = File
+appender.file.fileName = target/unit-tests.log
+appender.file.append = true
+appender.file.layout.type = PatternLayout
+appender.file.layout.pattern = %d{yy/MM/dd HH:mm:ss.SSS} %t %p %c{1}: %m%n%ex

pom.xml

@@ -72,6 +72,8 @@
         <jackson.version>2.13.4</jackson.version>
         <jts.version>1.19.0</jts.version>
         <jts2geojson.version>0.16.1</jts2geojson.version>
+        <log4j.version>2.17.2</log4j.version>
+        <slf4j.version>1.7.36</slf4j.version>
         <spark.version>3.3.0</spark.version>
         <spark.compat.version>3.0</spark.compat.version>
 
@@ -90,6 +92,15 @@
             <groupId>junit</groupId>
             <artifactId>junit</artifactId>
         </dependency>
+        <!-- Include log4j deps for tests for consistent logging across modules-->
+        <dependency>
+            <groupId>org.apache.logging.log4j</groupId>
+            <artifactId>log4j-core</artifactId>
+        </dependency>
+        <dependency>
+            <groupId>org.apache.logging.log4j</groupId>
+            <artifactId>log4j-slf4j-impl</artifactId>
+        </dependency>
     </dependencies>
 
     <dependencyManagement>
@@ -193,6 +204,17 @@
                 <artifactId>spark-core_${scala.compat.version}</artifactId>
                 <version>${spark.version}</version>
                 <scope>provided</scope>
+                <!-- Exclude log4j 1 for older versions of Spark-->
+                <exclusions>
+                    <exclusion>
+                        <groupId>log4j</groupId>
+                        <artifactId>log4j</artifactId>
+                    </exclusion>
+                    <exclusion>
+                        <groupId>org.slf4j</groupId>
+                        <artifactId>slf4j-log4j12</artifactId>
+                    </exclusion>
+                </exclusions>
             </dependency>
             <dependency>
                 <groupId>org.apache.spark</groupId>
@@ -210,12 +232,41 @@
                         <groupId>log4j</groupId>
                         <artifactId>log4j</artifactId>
                     </exclusion>
+                    <exclusion>
+                        <groupId>ch.qos.reload4j</groupId>
+                        <artifactId>reload4j</artifactId>
+                    </exclusion>
                     <exclusion>
                         <groupId>org.slf4j</groupId>
-                        <artifactId>slf4j-log4j12</artifactId>
+                        <artifactId>*</artifactId>
                     </exclusion>
                 </exclusions>
             </dependency>
+            <dependency>
+                <groupId>org.slf4j</groupId>
+                <artifactId>slf4j-api</artifactId>
+                <version>${slf4j.version}</version>
+                <scope>provided</scope>
+            </dependency>
+            <dependency>
+                <groupId>org.apache.logging.log4j</groupId>
+                <artifactId>log4j-1.2-api</artifactId>
+                <version>${log4j.version}</version>
+                <scope>provided</scope>
+            </dependency>
+            <!-- Just include log4j deps for tests for consistent logging across modules-->
+            <dependency>
+                <groupId>org.apache.logging.log4j</groupId>
+                <artifactId>log4j-core</artifactId>
+                <version>${log4j.version}</version>
+                <scope>test</scope>
+            </dependency>
+            <dependency>
+                <groupId>org.apache.logging.log4j</groupId>
+                <artifactId>log4j-slf4j-impl</artifactId>
+                <version>${log4j.version}</version>
+                <scope>test</scope>
+            </dependency>
             <dependency>
                 <groupId>commons-lang</groupId>
                 <artifactId>commons-lang</artifactId>

python-adapter/pom.xml

@@ -77,7 +77,11 @@
             <groupId>org.apache.hadoop</groupId>
             <artifactId>hadoop-client</artifactId>
         </dependency>
-       <dependency>
+        <dependency>
+            <groupId>org.apache.logging.log4j</groupId>
+            <artifactId>log4j-1.2-api</artifactId>
+        </dependency>
+        <dependency>
             <groupId>org.locationtech.jts</groupId>
             <artifactId>jts-core</artifactId>
         </dependency>

python-adapter/src/test/resources/log4j2.properties

@@ -0,0 +1,31 @@
+#
+# Licensed to the Apache Software Foundation (ASF) under one or more
+# contributor license agreements.  See the NOTICE file distributed with
+# this work for additional information regarding copyright ownership.
+# The ASF licenses this file to You under the Apache License, Version 2.0
+# (the "License"); you may not use this file except in compliance with
+# the License.  You may obtain a copy of the License at
+#
+#    http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+
+# Set everything to be logged to the file target/unit-tests.log
+rootLogger.level = info
+rootLogger.appenderRef.file.ref = File
+
+appender.file.type = File
+appender.file.name = File
+appender.file.fileName = target/unit-tests.log
+appender.file.append = true
+appender.file.layout.type = PatternLayout
+appender.file.layout.pattern = %d{yy/MM/dd HH:mm:ss.SSS} %t %p %c{1}: %m%n%ex
+
+# Ignore messages below warning level from Jetty, because it's a bit verbose
+logger.jetty.name = org.sparkproject.jetty
+logger.jetty.level = warn

sql/pom.xml

@@ -73,6 +73,10 @@
             <groupId>org.apache.hadoop</groupId>
             <artifactId>hadoop-client</artifactId>
         </dependency>
+        <dependency>
+            <groupId>org.apache.logging.log4j</groupId>
+            <artifactId>log4j-1.2-api</artifactId>
+        </dependency>
         <dependency>
             <groupId>org.geotools</groupId>
             <artifactId>gt-main</artifactId>

sql/src/test/resources/log4j2.properties

@@ -0,0 +1,31 @@
+#
+# Licensed to the Apache Software Foundation (ASF) under one or more
+# contributor license agreements.  See the NOTICE file distributed with
+# this work for additional information regarding copyright ownership.
+# The ASF licenses this file to You under the Apache License, Version 2.0
+# (the "License"); you may not use this file except in compliance with
+# the License.  You may obtain a copy of the License at
+#
+#    http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+
+# Set everything to be logged to the file target/unit-tests.log
+rootLogger.level = info
+rootLogger.appenderRef.file.ref = File
+
+appender.file.type = File
+appender.file.name = File
+appender.file.fileName = target/unit-tests.log
+appender.file.append = true
+appender.file.layout.type = PatternLayout
+appender.file.layout.pattern = %d{yy/MM/dd HH:mm:ss.SSS} %t %p %c{1}: %m%n%ex
+
+# Ignore messages below warning level from Jetty, because it's a bit verbose
+logger.jetty.name = org.sparkproject.jetty
+logger.jetty.level = warn

viz/pom.xml

@@ -77,7 +77,11 @@
             <groupId>org.apache.hadoop</groupId>
             <artifactId>hadoop-client</artifactId>
         </dependency>
-         <dependency>
+        <dependency>
+            <groupId>org.apache.logging.log4j</groupId>
+            <artifactId>log4j-1.2-api</artifactId>
+        </dependency>
+        <dependency>
             <groupId>org.locationtech.jts</groupId>
             <artifactId>jts-core</artifactId>
         </dependency>

viz/src/test/resources/log4j2.properties

@@ -0,0 +1,31 @@
+#
+# Licensed to the Apache Software Foundation (ASF) under one or more
+# contributor license agreements.  See the NOTICE file distributed with
+# this work for additional information regarding copyright ownership.
+# The ASF licenses this file to You under the Apache License, Version 2.0
+# (the "License"); you may not use this file except in compliance with
+# the License.  You may obtain a copy of the License at
+#
+#    http://www.apache.org/licenses/LICENSE-2.0
+#
+# Unless required by applicable law or agreed to in writing, software
+# distributed under the License is distributed on an "AS IS" BASIS,
+# WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+# See the License for the specific language governing permissions and
+# limitations under the License.
+#
+
+# Set everything to be logged to the file target/unit-tests.log
+rootLogger.level = info
+rootLogger.appenderRef.file.ref = File
+
+appender.file.type = File
+appender.file.name = File
+appender.file.fileName = target/unit-tests.log
+appender.file.append = true
+appender.file.layout.type = PatternLayout
+appender.file.layout.pattern = %d{yy/MM/dd HH:mm:ss.SSS} %t %p %c{1}: %m%n%ex
+
+# Ignore messages below warning level from Jetty, because it's a bit verbose
+logger.jetty.name = org.sparkproject.jetty
+logger.jetty.level = warn