Move `information_schema` tests out of execution/context.rs to `sql_integration` tests #1684

alamb · 2022-01-26T11:55:27Z

Which issue does this PR close?

related, perhaps, to #1505

Built on the great work of @matthewmturner and @hntd187

Rationale for this change

There are a bunch of tests in execution/context.rs that are not related to ExecutionContext (they are end to end tests for sql that happen to use the functions in ExecutionContext)

This both slows down compile times in the datafusion crate as well as makes it harder to discover existing test coverage.

This was annoying me recently when working in the context module so I decided to whip out a PR. I was iniitially going to do it in a single PR, but it was getting massive so I figured I would do it in chunks

What changes are included in this PR?

I broke this PR into two commits for (hopefully) easier review.

cut/paste the code from context.rs to various places in datafusion/tests/sql
The second then updates the tests to get them to run in their new home

Are there any user-facing changes?

No

alamb · 2022-01-26T11:55:49Z

datafusion/src/execution/context.rs

@@ -3551,476 +3550,6 @@ mod tests {
        Ok(())
    }

-    #[tokio::test]


this code is just moved out of here

alamb · 2022-01-26T11:57:39Z

datafusion/tests/sql/mod.rs

@@ -693,6 +695,21 @@ fn make_timestamp_nano_table() -> Result<Arc<MemTable>> {
    make_timestamp_table::<TimestampNanosecondType>()
 }

+/// Return a new table provider that has a single Int32 column with
+/// values between `seq_start` and `seq_end`
+pub fn table_with_sequence(


this is now duplicated with the code in datafusion/src/test which is only compiled in test mode and thus can't be used from integration tests such as sql_integration

I think ideally we would move the contents of datafusion/src/test into its own test_helpers crate or something so it could be shared 🤔

I like that and just use it in dev-dependencies where necessary.

I actually just tried to do this and I hit the issue that the test library would have to depend on DataFusion but then datafusion would depend on the test library resulting in a circular dependency and cargo sadness.

So my plan will be to continue cutting stuff out of context.rs and then aim eventually to remove all of datafusion/src/test (either to its own crate or elsewhere)

* feat: add join type for logical plan display (#1674) * (minor) Reduce memory manager and disk manager logs from `info!` to `debug!` (#1689) * Move `information_schema` tests out of execution/context.rs to `sql_integration` tests (#1684) * Move tests from context.rs to information_schema.rs * Fix up tests to compile * Move timestamp related tests out of context.rs and into sql integration test (#1696) * Move some tests out of context.rs and into sql * Move support test out of context.rs and into sql tests * Fixup tests and make them compile * Fix parquet projection * fix pruning casting * fix test based on debug strings * revert read_spill method by getting schema from file * Add `MemTrackingMetrics` to ease memory tracking for non-limited memory consumers (#1691) * Memory manager no longer track consumers, update aggregatedMetricsSet * Easy memory tracking with metrics * use tracking metrics in SPMS * tests * fix * doc * Update datafusion/src/physical_plan/sorts/sort.rs Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org> * make tracker AtomicUsize Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org> * Implement TableProvider for DataFrameImpl (#1699) * Add TableProvider impl for DataFrameImpl * Add physical plan in * Clean up plan construction and names construction * Remove duplicate comments * Remove unused parameter * Add test * Remove duplicate limit comment * Use cloned instead of individual clone * Reduce the amount of code to get a schema Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org> * Add comments to test * Fix plan comparison * Compare only the results of execution * Remove println * Refer to df_impl instead of table in test Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org> * Fix the register_table test to use the correct result set for comparison * Consolidate group/agg exprs * Format * Remove outdated comment Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org> * refine test in repartition.rs & coalesce_batches.rs (#1707) * Fuzz test for spillable sort (#1706) * Lazy TempDir creation in DiskManager (#1695) * Incorporate dyn scalar kernels (#1685) * Rebase * impl ToNumeric for ScalarValue * Update macro to be based on * Add floats * Cleanup * Newline * add annotation for select_to_plan (#1714) * Support `create_physical_expr` and `ExecutionContextState` or `DefaultPhysicalPlanner` for faster speed (#1700) * Change physical_expr creation API * Refactor API usage to avoid creating ExecutionContextState * Fixup ballista * clippy! * Fix can not load parquet table form spark in datafusion-cli. (#1665) * fix can not load parquet table form spark * add Invalid file in log. * fix fmt * add upper bound for pub fn (#1713) Signed-off-by: remzi <13716567376yh@gmail.com> * Create SchemaAdapter trait to map table schema to file schemas (#1709) * Create SchemaAdapter trait to map table schema to file schemas * Linting fix * Remove commented code * approx_quantile() aggregation function (#1539) * feat: implement TDigest for approx quantile Adds a [TDigest] implementation providing approximate quantile estimations of large inputs using a small amount of (bounded) memory. A TDigest is most accurate near either "end" of the quantile range (that is, 0.1, 0.9, 0.95, etc) due to the use of a scalaing function that increases resolution at the tails. The paper claims single digit part per million errors for q ≤ 0.001 or q ≥ 0.999 using 100 centroids, and in practice I have found accuracy to be more than acceptable for an apprixmate function across the entire quantile range. The implementation is a modified copy of https://github.com/MnO2/t-digest, itself a Rust port of [Facebook's C++ implementation]. Both Facebook's implementation, and Mn02's Rust port are Apache 2.0 licensed. [TDigest]: https://arxiv.org/abs/1902.04023 [Facebook's C++ implementation]: https://github.com/facebook/folly/blob/main/folly/stats/TDigest.h * feat: approx_quantile aggregation Adds the ApproxQuantile physical expression, plumbing & test cases. The function signature is: approx_quantile(column, quantile) Where column can be any numeric type (that can be cast to a float64) and quantile is a float64 literal between 0 and 1. * feat: approx_quantile dataframe function Adds the approx_quantile() dataframe function, and exports it in the prelude. * refactor: bastilla approx_quantile support Adds bastilla wire encoding for approx_quantile. Adding support for this required modifying the AggregateExprNode proto message to support propigating multiple LogicalExprNode aggregate arguments - all the existing aggregations take a single argument, so this wasn't needed before. This commit adds "repeated" to the expr field, which I believe is backwards compatible as described here: https://developers.google.com/protocol-buffers/docs/proto3#updating Specifically, adding "repeated" to an existing message field: "For ... message fields, optional is compatible with repeated" No existing tests needed fixing, and a new roundtrip test is included that covers the change to allow multiple expr. * refactor: use input type as return type Casts the calculated quantile value to the same type as the input data. * fixup! refactor: bastilla approx_quantile support * refactor: rebase onto main * refactor: validate quantile value Ensures the quantile values is between 0 and 1, emitting a plan error if not. * refactor: rename to approx_percentile_cont * refactor: clippy lints * suppport bitwise and as an example (#1653) * suppport bitwise and as an example * Use $OP in macro rather than `&` * fix: change signature to &dyn Array * fmt Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org> * fix: substr - correct behaivour with negative start pos (#1660) * minor: fix cargo run --release error (#1723) * Convert boolean case expressions to boolean logic (#1719) * Convert boolean case expressions to boolean logic * Review feedback * substitute `parking_lot::Mutex` for `std::sync::Mutex` (#1720) * Substitute parking_lot::Mutex for std::sync::Mutex * enable parking_lot feature in tokio * Add Expression Simplification API (#1717) * Add Expression Simplification API * fmt * use from_slice(&[T]) instead of from_slice(Vec<T>) to prevent future merge conflicts * fix decimal add because arrow2 doesn't include decimal add in arithmetics::add * fix decimal scale for cast test * fix parquet file format adapted projection by providing the proper schema to the RecordBatch Co-authored-by: xudong.w <wxd963996380@gmail.com> Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org> Co-authored-by: Yijie Shen <henry.yijieshen@gmail.com> Co-authored-by: Phillip Cloud <417981+cpcloud@users.noreply.github.com> Co-authored-by: Matthew Turner <matthew.m.turner@outlook.com> Co-authored-by: Yang <37145547+Ted-Jiang@users.noreply.github.com> Co-authored-by: Remzi Yang <59198230+HaoYang670@users.noreply.github.com> Co-authored-by: Dan Harris <1327726+thinkharderdev@users.noreply.github.com> Co-authored-by: Dom <dom@itsallbroken.com> Co-authored-by: Kun Liu <liukun@apache.org> Co-authored-by: Dmitry Patsura <talk@dmtry.me> Co-authored-by: Raphael Taylor-Davies <1781103+tustvold@users.noreply.github.com>

* feat: add join type for logical plan display (#1674) * (minor) Reduce memory manager and disk manager logs from `info!` to `debug!` (#1689) * Move `information_schema` tests out of execution/context.rs to `sql_integration` tests (#1684) * Move tests from context.rs to information_schema.rs * Fix up tests to compile * Move timestamp related tests out of context.rs and into sql integration test (#1696) * Move some tests out of context.rs and into sql * Move support test out of context.rs and into sql tests * Fixup tests and make them compile * Add `MemTrackingMetrics` to ease memory tracking for non-limited memory consumers (#1691) * Memory manager no longer track consumers, update aggregatedMetricsSet * Easy memory tracking with metrics * use tracking metrics in SPMS * tests * fix * doc * Update datafusion/src/physical_plan/sorts/sort.rs Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org> * make tracker AtomicUsize Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org> * Implement TableProvider for DataFrameImpl (#1699) * Add TableProvider impl for DataFrameImpl * Add physical plan in * Clean up plan construction and names construction * Remove duplicate comments * Remove unused parameter * Add test * Remove duplicate limit comment * Use cloned instead of individual clone * Reduce the amount of code to get a schema Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org> * Add comments to test * Fix plan comparison * Compare only the results of execution * Remove println * Refer to df_impl instead of table in test Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org> * Fix the register_table test to use the correct result set for comparison * Consolidate group/agg exprs * Format * Remove outdated comment Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org> * refine test in repartition.rs & coalesce_batches.rs (#1707) * Fuzz test for spillable sort (#1706) * Lazy TempDir creation in DiskManager (#1695) * Incorporate dyn scalar kernels (#1685) * Rebase * impl ToNumeric for ScalarValue * Update macro to be based on * Add floats * Cleanup * Newline * add annotation for select_to_plan (#1714) * Support `create_physical_expr` and `ExecutionContextState` or `DefaultPhysicalPlanner` for faster speed (#1700) * Change physical_expr creation API * Refactor API usage to avoid creating ExecutionContextState * Fixup ballista * clippy! * Fix can not load parquet table form spark in datafusion-cli. (#1665) * fix can not load parquet table form spark * add Invalid file in log. * fix fmt * add upper bound for pub fn (#1713) Signed-off-by: remzi <13716567376yh@gmail.com> * Create SchemaAdapter trait to map table schema to file schemas (#1709) * Create SchemaAdapter trait to map table schema to file schemas * Linting fix * Remove commented code * approx_quantile() aggregation function (#1539) * feat: implement TDigest for approx quantile Adds a [TDigest] implementation providing approximate quantile estimations of large inputs using a small amount of (bounded) memory. A TDigest is most accurate near either "end" of the quantile range (that is, 0.1, 0.9, 0.95, etc) due to the use of a scalaing function that increases resolution at the tails. The paper claims single digit part per million errors for q ≤ 0.001 or q ≥ 0.999 using 100 centroids, and in practice I have found accuracy to be more than acceptable for an apprixmate function across the entire quantile range. The implementation is a modified copy of https://github.com/MnO2/t-digest, itself a Rust port of [Facebook's C++ implementation]. Both Facebook's implementation, and Mn02's Rust port are Apache 2.0 licensed. [TDigest]: https://arxiv.org/abs/1902.04023 [Facebook's C++ implementation]: https://github.com/facebook/folly/blob/main/folly/stats/TDigest.h * feat: approx_quantile aggregation Adds the ApproxQuantile physical expression, plumbing & test cases. The function signature is: approx_quantile(column, quantile) Where column can be any numeric type (that can be cast to a float64) and quantile is a float64 literal between 0 and 1. * feat: approx_quantile dataframe function Adds the approx_quantile() dataframe function, and exports it in the prelude. * refactor: bastilla approx_quantile support Adds bastilla wire encoding for approx_quantile. Adding support for this required modifying the AggregateExprNode proto message to support propigating multiple LogicalExprNode aggregate arguments - all the existing aggregations take a single argument, so this wasn't needed before. This commit adds "repeated" to the expr field, which I believe is backwards compatible as described here: https://developers.google.com/protocol-buffers/docs/proto3#updating Specifically, adding "repeated" to an existing message field: "For ... message fields, optional is compatible with repeated" No existing tests needed fixing, and a new roundtrip test is included that covers the change to allow multiple expr. * refactor: use input type as return type Casts the calculated quantile value to the same type as the input data. * fixup! refactor: bastilla approx_quantile support * refactor: rebase onto main * refactor: validate quantile value Ensures the quantile values is between 0 and 1, emitting a plan error if not. * refactor: rename to approx_percentile_cont * refactor: clippy lints * suppport bitwise and as an example (#1653) * suppport bitwise and as an example * Use $OP in macro rather than `&` * fix: change signature to &dyn Array * fmt Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org> * fix: substr - correct behaivour with negative start pos (#1660) * minor: fix cargo run --release error (#1723) * Convert boolean case expressions to boolean logic (#1719) * Convert boolean case expressions to boolean logic * Review feedback * substitute `parking_lot::Mutex` for `std::sync::Mutex` (#1720) * Substitute parking_lot::Mutex for std::sync::Mutex * enable parking_lot feature in tokio * Add Expression Simplification API (#1717) * Add Expression Simplification API * fmt * Add tests and CI for optional pyarrow module (#1711) * Implement other side of conversion * Add test workflow * Add (failing) tests * Get unit tests passing * Use python -m pip * Debug LD_LIBRARY_PATH * Set LIBRARY_PATH * Update help with better info * Update parking_lot requirement from 0.11 to 0.12 (#1735) Updates the requirements on [parking_lot](https://github.com/Amanieu/parking_lot) to permit the latest version. - [Release notes](https://github.com/Amanieu/parking_lot/releases) - [Changelog](https://github.com/Amanieu/parking_lot/blob/master/CHANGELOG.md) - [Commits](Amanieu/parking_lot@0.11.0...0.12.0) --- updated-dependencies: - dependency-name: parking_lot dependency-type: direct:production ... Signed-off-by: dependabot[bot] <support@github.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> * Prevent repartitioning of certain operator's direct children (#1731) (#1732) * Prevent repartitioning of certain operator's direct children (#1731) * Update ballista tests * Don't repartition children of RepartitionExec * Revert partition restriction on Repartition and Projection * Review feedback * Lint * API to get Expr's type and nullability without a `DFSchema` (#1726) * API to get Expr type and nullability without a `DFSchema` * Add test * publically export * Improve docs * Fix typos in crate documentation (#1739) * add `cargo check --release` to ci (#1737) * remote test * Update .github/workflows/rust.yml Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org> Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org> * Move optimize test out of context.rs (#1742) * Move optimize test out of context.rs * Update * use clap 3 style args parsing for datafusion cli (#1749) * use clap 3 style args parsing for datafusion cli * upgrade cli version * Add partitioned_csv setup code to sql_integration test (#1743) * use ordered-float 2.10 (#1756) Signed-off-by: Andy Grove <agrove@apache.org> * #1768 Support TimeUnit::Second in hasher (#1769) * Support TimeUnit::Second in hasher * fix linter * format (#1745) * Create built-in scalar functions programmatically (#1734) * create build-in scalar functions programatically Signed-off-by: remzi <13716567376yh@gmail.com> * solve conflict Signed-off-by: remzi <13716567376yh@gmail.com> * fix spelling mistake Signed-off-by: remzi <13716567376yh@gmail.com> * rename to call_fn Signed-off-by: remzi <13716567376yh@gmail.com> * [split/1] split datafusion-common module (#1751) * split datafusion-common module * pyarrow * Update datafusion-common/README.md Co-authored-by: Andy Grove <agrove@apache.org> * Update datafusion/Cargo.toml * include publishing Co-authored-by: Andy Grove <agrove@apache.org> * fix: Case insensitive unquoted identifiers (#1747) * move dfschema and column (#1758) * add datafusion-expr module (#1759) * move column, dfschema, etc. to common module (#1760) * include window frames and operator into datafusion-expr (#1761) * move signature, type signature, and volatility to split module (#1763) * [split/10] split up expr for rewriting, visiting, and simplification traits (#1774) * split up expr for rewriting, visiting, and simplification * add docs * move built-in scalar functions (#1764) * split expr type and null info to be expr-schemable (#1784) * rewrite predicates before pushing to union inputs (#1781) * move accumulator and columnar value (#1765) * move accumulator and columnar value (#1762) * fix bad data type in test_try_cast_decimal_to_decimal * added projections for avro columns Co-authored-by: xudong.w <wxd963996380@gmail.com> Co-authored-by: Andrew Lamb <andrew@nerdnetworks.org> Co-authored-by: Yijie Shen <henry.yijieshen@gmail.com> Co-authored-by: Phillip Cloud <417981+cpcloud@users.noreply.github.com> Co-authored-by: Matthew Turner <matthew.m.turner@outlook.com> Co-authored-by: Yang <37145547+Ted-Jiang@users.noreply.github.com> Co-authored-by: Remzi Yang <59198230+HaoYang670@users.noreply.github.com> Co-authored-by: Dan Harris <1327726+thinkharderdev@users.noreply.github.com> Co-authored-by: Dom <dom@itsallbroken.com> Co-authored-by: Kun Liu <liukun@apache.org> Co-authored-by: Dmitry Patsura <talk@dmtry.me> Co-authored-by: Raphael Taylor-Davies <1781103+tustvold@users.noreply.github.com> Co-authored-by: Will Jones <willjones127@gmail.com> Co-authored-by: dependabot[bot] <49699333+dependabot[bot]@users.noreply.github.com> Co-authored-by: r.4ntix <r.4ntix@gmail.com> Co-authored-by: Jiayu Liu <Jimexist@users.noreply.github.com> Co-authored-by: Andy Grove <agrove@apache.org> Co-authored-by: Rich <jychen7@users.noreply.github.com> Co-authored-by: Marko Mikulicic <mmikulicic@gmail.com> Co-authored-by: Eduard Karacharov <13005055+korowa@users.noreply.github.com>

alamb added 2 commits January 26, 2022 06:55

Move tests from context.rs to information_schema.rs

8485f2c

Fix up tests to compile

d92e03f

github-actions bot added the datafusion Changes in the datafusion crate label Jan 26, 2022

alamb commented Jan 26, 2022

View reviewed changes

alamb merged commit ed1de63 into apache:master Jan 28, 2022

This was referenced Jan 28, 2022

Move timestamp related tests out of context.rs and into sql integration test #1696

Merged

Move optimize test out of context.rs #1742

Merged

alamb deleted the alamb/cleanup_exec_context branch August 8, 2023 20:12

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Move `information_schema` tests out of execution/context.rs to `sql_integration` tests #1684

Move `information_schema` tests out of execution/context.rs to `sql_integration` tests #1684

alamb commented Jan 26, 2022

alamb Jan 26, 2022

alamb Jan 26, 2022

hntd187 Jan 26, 2022

alamb Jan 28, 2022

Move information_schema tests out of execution/context.rs to sql_integration tests #1684

Move information_schema tests out of execution/context.rs to sql_integration tests #1684

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alamb commented Jan 26, 2022

Which issue does this PR close?

Rationale for this change

What changes are included in this PR?

Are there any user-facing changes?

alamb Jan 26, 2022

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alamb Jan 26, 2022

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hntd187 Jan 26, 2022

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alamb Jan 28, 2022

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Move `information_schema` tests out of execution/context.rs to `sql_integration` tests #1684

Move `information_schema` tests out of execution/context.rs to `sql_integration` tests #1684