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Add selection alerts template and Vgsc, Coeaexf alerts #38

Add selection alerts template and Vgsc, Coeaexf alerts

Add selection alerts template and Vgsc, Coeaexf alerts #38

Workflow file for this run

name: test-build
on: pull_request
jobs:
run-workflow:
runs-on: ubuntu-latest
steps:
- name: Checkout repository
uses: actions/checkout@v2
- name: Restore GCS cache
uses: actions/cache/restore@v3
with:
path: gcs_cache
# Change this key if you ever want to force clear the cache.
key: gcs_cache_20230512
- name: Restore results cache
uses: actions/cache/restore@v3
with:
path: malariagen_data_cache
# Change this key if you ever want to force clear the cache.
key: results_cache_20230512
- name: Install conda environment
uses: mamba-org/provision-with-micromamba@main
with:
environment-file: environment.yml
environment-name: selection-atlas
cache-downloads: true
- name: Run snakemake workflow
shell: bash -l {0}
run: |
snakemake -c1 --configfile ci/config.yaml
- name: Save GCS cache
uses: actions/cache/save@v3
if: always()
with:
path: gcs_cache
# Change this key if you ever want to force clear the cache.
key: gcs_cache_20230512
- name: Save results cache
uses: actions/cache/save@v3
if: always()
with:
path: malariagen_data_cache
# Change this key if you ever want to force clear the cache.
key: results_cache_20230512