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scRNAseq_Dentalpulp

R

version 3.6.0

Dependencies

DoubletFinder_2.0.3

SoupX_1.5.0

DESeq2_1.26.0

RColorBrewer_1.1-2

png_0.1-7

apeglm_1.8.0

pheatmap_1.0.12

reshape2_1.4.4

magrittr_2.0.1

edgeR_3.28.1

limma_3.42.2

Matrix.utils_0.9.8

Matrix_1.2-18

cowplot_1.1.1

forcats_0.5.1

stringr_1.4.0.9000

dplyr_1.0.7

purrr_0.3.4

readr_1.4.0

tidyr_1.1.3

tibble_3.1.2

tidyverse_1.3.0

scater_1.14.6

ggplot2_3.3.4

SingleCellExperiment_1.8.0

SummarizedExperiment_1.16.1

DelayedArray_0.12.3

BiocParallel_1.20.1

matrixStats_0.59.0

Biobase_2.46.0

GenomicRanges_1.38.0

GenomeInfoDb_1.22.1

IRanges_2.20.2

S4Vectors_0.24.4

BiocGenerics_0.32.0

Seurat_3.2.3

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  • R 89.7%
  • Shell 10.3%