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Update Python package versions and add links to tools
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anand-imcm committed Apr 2, 2024
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Expand Up @@ -64,13 +64,12 @@ The output is a set of files containing the extracted information.
## Components

- **Python packages**
- pysam
- pandas
- argparse
- pysam==0.22.0
- pandas==2.2.1

- **Tools**
- bcftools
- plink2
- [bcftools](https://doi.org/10.1093/gigascience/giab008)
- [PLINK 2.0](https://doi.org/10.1186/s13742-015-0047-8)

- **Containers**
- ghcr.io/anand-imcm/get-variant-info

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