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Add template for document generation with 'jsdoc'. (#3497)
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* Add template for document generation with 'jsdoc'.

In essence, it defines the subdirectory `docs` as a `jsdoc` template. Benefits:

- allows the usage of partials, in order to DRY common parts of the html files.
- makes available the jsdoc-comments, for addition into the documentation.
- enables extraction of data from the source code. For example, the list of edge endpoints `['arrow', 'bar', 'circle']` can now be extracted from the source and inserted into the documentation on generation.

In this initial version, the only file that has been changed is `docs/data/dataset.html`.
In here, partials have been added to illustrate how common page elements can be DRY'd.

The template has been set up in such a way, that resource files will be copied and that html files can pass through unchanged if no special template tags (`<?js...?>`) are used. This allows for a gradual transition of the html files to templates.

**Usage:**  `gulp docs`

- The result files are placed in subdirectory `gen/docs/`.

**NOTE:** The release procedure will have to be adjusted by adding this gulp command.
The docs-files will then have to be taken from `gen/docs`.

* Edits to docs/README

* Adjusted layout of README.md

* Further edits to README.md

* Removed pre tags again in  README.md - don't work in code block

* Linted the gulpfile

* Added proof of concept for docs generation from source
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wimrijnders authored and yotamberk committed Oct 20, 2017
1 parent 0a6f257 commit 24d61cb
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# temporary files
.*.sw[op]
.commits.tmp
gen/
231 changes: 231 additions & 0 deletions docs/README.md
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# Command line usage example

```
jsdoc -c jsdoc.json -r -t docs -d gen/docs lib
```

- `-c`: use this config file for `jsdoc`
- `-r`: Recurse into subdirectories of the specified source directories
- `-t`: Use template in path `docs`
- `-d`: Generated html files put in `gen/docs`
- Source files to parse are taken from directory `lib`


## Notes

The template generation is set up so that:

- Files ending in `.tmpl` are skipped
- All non-html files are plain copied
- html-files *can* contain `<?js ?>` tags, but this is not required


## Intention

The `docs` directory is treated as a `jsdoc` template, in which the html-files are the template files. This allows for a gradual adaptation of the html-files to templates; unchanged html-files will pass through `jsdoc` unchanged.

The added value of using `jsdoc` for documentation generation, is that the complete documentation information, as collected by `jsdoc` from the source, is available for usage. This way, it's possible to insert technical notes from the source code into the documentation.

----

# Usage of and Notes on Source Code

This section contains notes on the usage of `jsdoc` functionality, to aid with the handling of its generated data.


## Parameters of `publish()`

### Parameter `taffyData`

A table containing *all* data collected from the source code, related to jsdoc generation. See below for more info and example outputs.

### Parameter `opt`

Example of `opt` variable:

```js
{
"_":["../github/vis/lib/network/"],
"configure":"jsdoc.json",
"recurse":true,
"template":"/home/wim/projects/jsdoc/default",
"destination":"./out/",
"encoding":"utf8"
}
```

### Parameter `tutorial`

This does not appear to be of use for the generation of `vis.js` documentation.

Example of `tutorial` variable:

```js
{
"longname":"",
"name":"",
"title":"",
"content":"",
"parent":null,
"children":[],
"_tutorials":{}
}
```

## Global variable `env`

This contains addition info for the current execution of `jsdoc`. Example of `env` variable:

```js
{
"run":{"start":"2017-09-16T05:06:45.621Z","finish":null},
"args":["-c","jsdoc.json","-r","-t","default","../github/vis/lib/network/"],
"conf":{
"plugins":["/usr/lib/node_modules/jsdoc/plugins/markdown.js"],
"recurseDepth":10,
"source":{"includePattern":".+\\.js(doc|x)?$","excludePattern":""},
"sourceType":"module",
"tags":{"allowUnknownTags":true,"dictionaries":["jsdoc","closure"]},
"templates":{"monospaceLinks":false,"cleverLinks":false}
},
"dirname":"/usr/lib/node_modules/jsdoc",
"pwd":"/home/wim/projects/jsdoc",
"opts":{ <<same as parameter 'opt' above>> },
"sourceFiles":[ <<list of full path names of all js-source files used as input>> ],
"version":{"number":"3.5.4","revision":"Fri, 04 Aug 2017 22:05:27 GMT"}
}
```


## taffyData

This is a parameter to `publish()`. It's a table containing *all* data collected from the source code, related to jsdoc generation.

I can't find any way to return a list of fields for the data items in the taffyDB docs, therefore below there are examples of items, for better understanding of usage.

Example usage:

```js
var data = taffyData;
var tmp = data().filter({name:'Label'}).get();
```

Returns an array with all items with `name === 'Label'`. Example output of one of these items, for a class:

*In these examples, block comment endings are redacted to ' * /'*

```js
{
"comment":"/**\n * A Label to be used for Nodes or Edges.\n * /",
"meta":{
"range":[3770,41303],
"filename":"Label.js",
"lineno":167,
"columnno":0,
"path":"/home/wim/projects/github/vis/lib/network/modules/components/shared",
"code":{
"id":"astnode100065034",
"name":"Label",
"type":"ClassDeclaration",
"paramnames":["body","options","edgelabel"]
}
},
"classdesc":"
A Label to be used for Nodes or Edges.
",
"name":"Label",
"longname":"Label",
"kind":"class",
"scope":"global",
"params":[
{"type":{"names":["Object"]},"name":"body"},
{"type":{"names":["Object"]},"name":"options"},
{"type":{"names":["boolean"]},"optional":true,"defaultvalue":false,"name":"edgelabel"}
],
"___id":"T000002R005289",
"___s":true
}
```

Example of item for an instance method:

```js
var tmp = data().filter({name:'_drawText'}).get();
```

Full output returned:

```js
[{
"comment":"/**\n *\n * @param {CanvasRenderingContext2D} ctx\n * @param {boolean} selected\n * @param {boolean} hover\n * @param {number} x\n * @param {number} y\n * @param {string} [baseline='middle']\n * @private\n * /",
"meta":{
"range":[20060,22269],
"filename":"Label.js",
"lineno":652,
"columnno":2,
"path":"/home/wim/projects/github/vis/lib/network/modules/components/shared",
"code":{
"id":"astnode100066427",
"name":"Label#_drawText",
"type":"MethodDefinition",
"paramnames":["ctx","selected","hover","x","y","baseline"]
},
"vars":{"":null}
},
"params":[
{"type":{"names":["CanvasRenderingContext2D"]},"name":"ctx"},
{"type":{"names":["boolean"]},"name":"selected"},
{"type":{"names":["boolean"]},"name":"hover"},
{"type":{"names":["number"]},"name":"x"},
{"type":{"names":["number"]},"name":"y"},
{"type":{"names":["string"]},"optional":true,"defaultvalue":"'middle'","name":"baseline"}
],
"access":"private",
"name":"_drawText",
"longname":"Label#_drawText",
"kind":"function",
"memberof":"Label",
"scope":"instance",
"___id":"T000002R005388",
"___s":true
}]
```

## `jsdoc` template rendering

See `function createRenderer(fromDir, data)` in code for usage.

There are two calls for rendering templates:

- `var html = renderer.render(inFile, docData);`
- `var html = renderer.partial(inFile, docData);`

The difference is that `render()` will use a default layout template, if present, which will encapsulate all html. This can be set by:

```js
renderer.layout = 'path/to/default/layout.tmpl';
```

Parameter `docData` is a hash which is used to pass parameters into a template. The standard way of using this appear to be:

```
<?js
var data = obj; // Whatever docData is
var self = this;
?>
```

But it also appear to be possible to use the elements of docData directly:

```js
var docData = {
myTitle: 'Hello, pussycat!'
};
```

Within the template:

```
<?js= myTitle ?>
```
87 changes: 6 additions & 81 deletions docs/data/dataset.html
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<!DOCTYPE html>
<html lang="en"><head>
<meta charset="utf-8">
<meta http-equiv="X-UA-Compatible" content="IE=edge">
<meta name="viewport" content="width=device-width, initial-scale=1">
<meta name="description" content="">
<meta name="author" content="">
<link rel="icon" HREF="favicon.ico">
<title>DataSet - vis.js - A dynamic, browser based visualization library.</title>

<!-- Bootstrap core CSS -->
<link href="../css/bootstrap.css" rel="stylesheet">
<!-- Tipue vendor css -->
<link href="../css/tipuesearch.css" rel="stylesheet">

<link href="../css/style.css" rel="stylesheet">


<!-- HTML5 shim and Respond.js for IE8 support of HTML5 elements and media queries -->
<!--[if lt IE 9]>
<script src="https://oss.maxcdn.com/html5shiv/3.7.2/html5shiv.min.js"></script>
<script src="https://oss.maxcdn.com/respond/1.4.2/respond.min.js"></script>
<![endif]-->


<link href="../css/prettify.css" type="text/css" rel="stylesheet"/>
<script type="text/javascript" src="../js/googleAnalytics.js"></script>
<script type="text/javascript" src="../js/prettify/prettify.js"></script>

<script src="../js/smooth-scroll.min.js"></script>
<script language="JavaScript">
smoothScroll.init();
</script>

<script type="text/javascript" src="../js/toggleTable.js"></script>
<?js
var self = this;
var title = 'DataSet - vis.js - A dynamic, browser based visualization library.';
?>
<?js= self.partial('tmpl/html-head.tmpl', title) ?>
</head>
<body onload="prettyPrint();">

<div class="navbar-wrapper">
<div class="container">
<nav class="navbar navbar-inverse navbar-static-top" role="navigation">
<div class="container">
<div class="navbar-header">
<button type="button" class="navbar-toggle collapsed" data-toggle="collapse" data-target="#navbar"
aria-expanded="false" aria-controls="navbar">
<span class="sr-only">Toggle navigation</span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
<span class="icon-bar"></span>
</button>
<a class="navbar-brand hidden-sm" href="./index.html">vis.js</a>
</div>
<div id="navbar" class="navbar-collapse collapse">
<ul class="nav navbar-nav">
<li><a href="http://www.visjs.org/index.html#modules">Modules</a></li>
<li><a href="http://www.visjs.org/blog.html">Blog</a></li>
<li><a href="http://www.visjs.org/index.html#download_install">Download</a></li>
<li><a href="http://www.visjs.org/showcase/index.html">Showcase</a></li>
<li><a href="http://www.visjs.org/index.html#contribute">Contribute</a></li>
<li><a href="http://www.visjs.org/featureRequests.html">Feature requests</a></li>
<li><a href="http://www.visjs.org/index.html#licenses">License</a></li>
</ul>
<form class="navbar-form navbar-right" role="search">
<input name="q" id="tipue_search_input" autocomplete="off" type="text" class="form-control" placeholder="Enter keywords">
<button type="submit" class="btn btn-default">Go!</button>
</form>
<div id="search-results-wrapper" class="panel panel-default">
<div class="panel-body">
<div id="tipue_search_content"></div>
</div>
</div>
<div id="keyword-info" class="panel panel-success">
<div class="panel-body">
Found <span id="keyword-count"></span> results. Click <a id="keyword-jumper-button" href="">here</a> to jump to the first keyword occurence!
</div>
</div>
</div>
</div>
</nav>
</div>
</div>

<a href="https://github.com/almende/vis" class="hidden-xs hidden-sm hidden-md"><img style="position: absolute; top: 0; right: 0; border: 0;" src="https://camo.githubusercontent.com/38ef81f8aca64bb9a64448d0d70f1308ef5341ab/68747470733a2f2f73332e616d617a6f6e6177732e636f6d2f6769746875622f726962626f6e732f666f726b6d655f72696768745f6461726b626c75655f3132313632312e706e67" alt="Fork me on GitHub" data-canonical-src="https://s3.amazonaws.com/github/ribbons/forkme_right_darkblue_121621.png"></a>
<?js= self.partial('tmpl/navbar.tmpl', title) ?>
<div class="container full">

<h1>DataSet</h1>
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<?js
var self = this;
?>
<!DOCTYPE html>
<html lang="en">
<head>
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The options object is explained in full <a data-scroll="" data-options="{ &quot;easing&quot;: &quot;easeInCubic&quot; }" href="#optionsObject">below</a>.
</td>
</tr>

<?js
var comment = self.getComment("Network#findNode");
?>
<tr class="collapsible toggle" onclick="toggleTable('methodTable','findNodeNew', this);">
<td colspan="2"><span parent="findNode" class="right-caret" id="method_findNodeNew"></span>
<?js= comment.prototype ?> <b>This comes from the source!</b>
</tr>
<tr class="hidden" parent="findNodeNew">
<td class="midMethods">Returns: <?js= comment.returns ?></td>
<td>
<?js= comment.description ?>
</td>
</tr>

<tr class="collapsible toggle" onclick="toggleTable('methodTable','findNode', this);">
<td colspan="2"><span parent="findNode" class="right-caret" id="method_findNode"></span> findNode(
<code>String/Number nodeId</code>)
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