Fixed small error in README.md and removed full_pipeline.sh

aljpetri · Jan 24, 2024 · 659100c · 659100c
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diff --git a/README.md b/README.md
@@ -57,7 +57,7 @@ To only run the isONform algorithm:<br />
 
 
 ```
-python isONform_parallel.py --fastq_folder path/to/input/files --t <nr_cores> --outfolder /path/to/outfolder --split_wrt_batches 
+isONform_parallel --fastq_folder path/to/input/files --t <nr_cores> --outfolder /path/to/outfolder --split_wrt_batches 
 ```
 
 Note: Please always give absolute paths to the files or folders

diff --git a/full_pipeline.sh b/full_pipeline.sh
-Original file line number
+Diff line change
@@ Expand Up / @@ -57,7 +57,7 @@ To only run the isONform algorithm:<br /> @@
     ```
-    python isONform_parallel.py --fastq_folder path/to/input/files --t <nr_cores> --outfolder /path/to/outfolder --split_wrt_batches
+    isONform_parallel --fastq_folder path/to/input/files --t <nr_cores> --outfolder /path/to/outfolder --split_wrt_batches
     ```
     Note: Please always give absolute paths to the files or folders
@@ Expand Down @@