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  • Altius Institute for Biomedical Sciences
  • Seattle, WA USA

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  1. bedops/bedops bedops/bedops Public

    🔬 BEDOPS: high-performance genomic feature operations

    C 302 60

  2. sample sample Public

    Performs memory-efficient reservoir sampling on very large input files delimited by newlines

    C 69 12

  3. byte-store byte-store Public

    Generate and explore upper triangular and square matrices of 1-byte values

    C 2 2

  4. soda soda Public

    Python-based UCSC genome browser snapshot-taker and gallery-maker

    JavaScript 12 3

  5. kmer-collapse kmer-collapse Public

    Collapse a set of redundant kmers to use IUPAC degenerate bases

    Python 3

  6. filter-regions filter-regions Public

    Filter genomic regions by score and proximity

    Python 1