Provides an Intake interface to synthetic cryoEM images from VNE.
Installation:
pip install git+https://github.com/alan-turing-institute/intake-alphabetsoup.git
Usage:
import intake
cat = intake.open_synthetic_alphabetsoup(
image_count = 1,
shape=(512, 512),
ctf_box_size=512,
ctf_defocus=5000.0,
)
images, bounding_boxes, labels = cat.read()