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docs: update the docs;
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WenjieDu committed Oct 11, 2023
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5 changes: 4 additions & 1 deletion README.md
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Expand Up @@ -162,6 +162,7 @@ PyPOTS supports imputation, classification, clustering, and forecasting tasks on
| **Type** | **Abbr.** | **Full name of the algorithm/model/paper** | **Year** |
| Neural Net | SAITS | Self-Attention-based Imputation for Time Series [^1] | 2023 |
| Neural Net | Transformer | Attention is All you Need [^2];<br>Self-Attention-based Imputation for Time Series [^1];<br><sub>Note: proposed in [^2], and re-implemented as an imputation model in [^1].</sub> | 2017 |
| Neural Net | CSDI | Conditional Score-based Diffusion Models for Probabilistic Time Series Imputation [^12] | 2021 |
| Neural Net | US-GAN | Generative Semi-supervised Learning for Multivariate Time Series Imputation [^10] | 2021 |
| Neural Net | GP-VAE | GP-VAE: Deep Probabilistic Time Series Imputation [^11] | 2020 |
| Neural Net | BRITS | Bidirectional Recurrent Imputation for Time Series [^3] | 2018 |
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[^8]: Chen, X., & Sun, L. (2021). [Bayesian Temporal Factorization for Multidimensional Time Series Prediction](https://arxiv.org/abs/1910.06366). *IEEE transactions on pattern analysis and machine intelligence*.
[^9]: Yoon, J., Zame, W. R., & van der Schaar, M. (2019). [Estimating Missing Data in Temporal Data Streams Using Multi-Directional Recurrent Neural Networks](https://ieeexplore.ieee.org/document/8485748). *IEEE Transactions on Biomedical Engineering*.
[^10]: Miao, X., Wu, Y., Wang, J., Gao, Y., Mao, X., & Yin, J. (2021). [Generative Semi-supervised Learning for Multivariate Time Series Imputation](https://ojs.aaai.org/index.php/AAAI/article/view/17086). *AAAI 2021*.
[^11]: Fortuin, V., Baranchuk, D., Raetsch, G. & Mandt, S.. (2020). [GP-VAE: Deep Probabilistic Time Series Imputation](https://proceedings.mlr.press/v108/fortuin20a.html). *AISTATS 2020*.
[^11]: Fortuin, V., Baranchuk, D., Raetsch, G. & Mandt, S. (2020). [GP-VAE: Deep Probabilistic Time Series Imputation](https://proceedings.mlr.press/v108/fortuin20a.html). *AISTATS 2020*.
[^12]: Tashiro, Y., Song, J., Song, Y., & Ermon, S. (2021). [CSDI: Conditional Score-based Diffusion Models for Probabilistic Time Series Imputation](https://proceedings.neurips.cc/paper/2021/hash/cfe8504bda37b575c70ee1a8276f3486-Abstract.html). *NeurIPS 2021*.
<details>
<summary>🏠 Visits</summary>
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9 changes: 9 additions & 0 deletions docs/pypots.imputation.rst
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Expand Up @@ -19,6 +19,15 @@ pypots.imputation.transformer
:show-inheritance:
:inherited-members:

pypots.imputation.csdi
------------------------------

.. automodule:: pypots.imputation.csdi
:members:
:undoc-members:
:show-inheritance:
:inherited-members:

pypots.imputation.usgan
------------------------------

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25 changes: 10 additions & 15 deletions docs/references.bib
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Expand Up @@ -336,20 +336,6 @@ @article{tang2019JointModeling
keywords = {Computer Science - Machine Learning,Statistics - Machine Learning}
}

@article{tashiro2021CSDI,
title = {{{CSDI}}: {{Conditional Score-based Diffusion Models}} for {{Probabilistic Time Series Imputation}}},
author = {Tashiro, Yusuke and Song, Jiaming and Song, Yang and Ermon, Stefano},
year = {2021},
month = oct,
journal = {arXiv:2107.03502 [cs, stat]},
eprint = {2107.03502},
eprinttype = {arxiv},
primaryclass = {cs, stat},
url = {http://arxiv.org/abs/2107.03502},
archiveprefix = {arXiv},
keywords = {Computer Science - Machine Learning,Statistics - Machine Learning}
}

@inproceedings{vaswani2017Transformer,
author = {Vaswani, Ashish and Shazeer, Noam and Parmar, Niki and Uszkoreit, Jakob and Jones, Llion and Gomez, Aidan N and Kaiser, \L ukasz and Polosukhin, Illia},
booktitle = {Advances in Neural Information Processing Systems},
Expand Down Expand Up @@ -449,4 +435,13 @@ @article{calinski1974
pages={1--27},
year={1974},
publisher={Taylor \& Francis}
}
}

@inproceedings{tashiro2021csdi,
title={{CSDI}: Conditional Score-based Diffusion Models for Probabilistic Time Series Imputation},
author={YUSUKE TASHIRO and Jiaming Song and Yang Song and Stefano Ermon},
booktitle={Advances in Neural Information Processing Systems},
editor={A. Beygelzimer and Y. Dauphin and P. Liang and J. Wortman Vaughan},
year={2021},
url={https://openreview.net/forum?id=VzuIzbRDrum}
}
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