Update README.md #731
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| name: Run integration tests against Yoda | |
| on: | |
| push: | |
| branches: | |
| - develop | |
| pull_request: | |
| jobs: | |
| build: | |
| runs-on: ubuntu-22.04 | |
| if: | | |
| ${{ ! contains(github.event.head_commit.message, '#nointegrationtests') && | |
| ( github.event_name == 'push' || | |
| github.event.pull_request.head.repo.full_name == github.event.pull_request.base.repo.full_name | |
| ) | |
| }} | |
| steps: | |
| - uses: actions/checkout@v2 | |
| - name: Set up Python | |
| uses: actions/setup-python@v4 | |
| with: | |
| python-version: 3.9 | |
| - name: Install API test dependencies | |
| run: | | |
| pip3 install --user pytest | |
| pip3 install --user ./ | |
| sudo apt install -y docker-compose | |
| - name: Clone Yoda repo for Docker Setup | |
| run: | | |
| git clone -b v1.9.4 --single-branch https://github.com/UtrechtUniversity/yoda.git | |
| - name: Prepare hosts file for integration tests | |
| run: | | |
| sudo echo "127.0.0.1 provider.yoda portal.yoda" | sudo tee -a /etc/hosts | |
| - name: Start Dockerized Yoda | |
| run: | | |
| cd yoda/docker/compose | |
| docker-compose pull | |
| ../up.sh -d | |
| - name: Wait until Dockerized setup is ready | |
| shell: bash | |
| run: | | |
| until $(curl -k --output /dev/null --silent --head --fail https://portal.yoda:8443 ); do printf '.' ; sleep 1; done | |
| cd yoda/docker/compose | |
| docker exec provider.yoda sh -c 'while ! pgrep irodsServer > /dev/null ; do echo Waiting for iRODS to start ... ; sleep 1; done' | |
| - name: Pull and install latest version of ruleset | |
| shell: bash | |
| run: | | |
| cd yoda/docker/compose | |
| docker exec provider.yoda sh -c 'set -x ; cd /etc/irods/yoda-ruleset && sudo chown irods:irods -R /etc/irods/yoda-ruleset && sudo -u irods git config remote.origin.fetch "+refs/heads/*:refs/remotes/origin/*" && sudo -u irods git pull && sudo -u irods git status' | |
| docker exec provider.yoda sh -c "set -x ; cd /etc/irods/yoda-ruleset && sudo -u irods git checkout development && sudo -u irods python -m pip --no-cache-dir install --user -r /etc/irods/yoda-ruleset/requirements.txt && sudo -u irods make && sudo -u irods make install" | |
| docker exec provider.yoda sh -c "set -x ; sudo -u irods /var/lib/irods/irodsctl restart" | |
| - name: Pull and install latest version of portal | |
| shell: bash | |
| run: | | |
| cd yoda/docker/compose | |
| docker exec portal.yoda sh -c 'set -x ; cd /var/www/yoda && git config remote.origin.fetch "+refs/heads/*:refs/remotes/origin/*" && git pull' | |
| docker exec portal.yoda sh -c 'set -x ; cd /var/www/yoda && git checkout development || git checkout development' | |
| docker exec portal.yoda sh -c 'set -x ; cd /var/www/yoda && git status' | |
| docker exec portal.yoda sh -c 'set -x ; touch /var/www/yoda/*.wsgi' | |
| - name: Configure permissions for integration tests | |
| shell: bash | |
| run: | | |
| cd yoda/docker/compose | |
| docker exec provider.yoda sh -c 'set -x ; sudo -u irods ichmod own technicaladmin /tempZone/home/rods' | |
| - name: Run integration tests | |
| shell: bash | |
| run: | | |
| cd docker/irods_client | |
| mkdir environment | |
| cp environments/yoda/* environment | |
| cp -R testdata /tmp | |
| python3 -m pytest | |
| - name: Output rodsLogs | |
| if: failure() | |
| run: | | |
| docker exec provider.yoda sh -c 'set -x ; cat /var/lib/irods/log/rodsLog*' | |
| # Uncomment section below when needed for debugging. | |
| # | |
| # - name: Setup tmate session for debugging | |
| # uses: mxschmitt/action-tmate@v3 | |
| # if: ${{ failure() }} | |
| # with: | |
| # limit-access-to-actor: true |