Generate various types of data for testing Tripal functionality.
Currently Supports:
- Stocks (
drush generate-stocks): You can specify the type, organism and use tokens to generate the name and uniquename. Random names are choosen from http://uinames.com - Genotypes (
drush generate-genotypes): You can specify how many samples and how many variants to generate genotype calls for. Calls are stored in the custom genotype_call table as used by the ND Genotypes Module. Record layout described here: https://github.com/UofS-Pulse-Binfo/nd_genotypes/wiki/How-to-Store-your-Data#method-2-custom-genotype-call-table - Raw Phenotypes (
drush generate-raw-phenotypes): Generate Raw Phenotypic Data in CSV format for a specified phenotyping project. You can specify how many samples and if they should be created, as well as, a list of locations, the number of replicates to generate data for and the planting date which should be used. - Analyzed Phenotypes (
generate-phenotypes): Loads analyzed phenotypic data into a modified chado schema. For more details about the tables used see: UofS-Pulse-Binfo/analyzedphenotypes#1