Save as > No "save" window opening

[IbanezP]

I have tried under
Windows 10
and Manjaro (version installed through snap or through download and instructions on github (version 13.0.3)

none gives access to saving as...

Did I miss something?
Thanks

(ibanez.p.espci@gmail.com)
Operating System: Manjaro Linux
KDE Plasma Version: 5.21.3
KDE Frameworks Version: 5.80.0
Qt Version: 5.15.2
Kernel Version: 5.10.26-1-MANJARO
OS Type: 64-bit
Graphics Platform: X11
Processors: 4 × Intel® Core™ i5-7200U CPU @ 2.50GHz
Memory: 15,5 GiB of RAM
Graphics Processor: Mesa Intel® HD Graphics 620

[gmcarthuriv]

@tnrich, I can confirm that OVE is also not saving properly in macOS.

[tnrich]

Hey @IbanezP and @gmcarthuriv , thanks for raising this issue. I'll look into fixing this.. not sure why it broke. I need to figure out a good way to e2e-test the electron specific functionality.

[tnrich]

Hey @IbanezP and @gmcarthuriv I've published a new version (just did a republish) https://github.com/tnrich/ove-electron/releases/tag/v1.1.1 of ove-electron that should fix your issue. Let me know if it works for you.

A few notes:

• Unfortunately I am unable to publish a linux version of the tool to snapcraft due to snapcraft m1 incompatibilities (https://forum.snapcraft.io/t/not-able-to-run-snapcraft-login-on-mac-m1/24001/3). I think the AppImage should still work for linux though?
• I refactored how the main process and the renderer interact to adhere to new electron best practices. The code should be cleaner and more future proof now.
• Due to changes in how I initialize the renderer process it's possible VERY large sequences wouldn't work with OVE electron but it is unclear to me whether there is a limit here or not (https://stackoverflow.com/questions/38335004/how-to-pass-parameters-from-main-process-to-render-processes-in-electron/59347064#comment118661293_59347064)
• I wasn't able to find an easy way to test native dialog interactions on electron and so have suspended the push to do so. I think it could be done by stubbing all the functionality of the native dialogs but it seems like a lot of effort to do it so I am holding off for now.
• This release includes a native m1 version of the app (ARM mac download) and boy is it snapppppy!

Cheers!

[IbanezP]

Hi Thomas Thanks a lot! I tried it on Windows 10 and it looks perfect!!!! Few comments : Default saving is .gb, but possible to save as .fasta .json and .bed Shortcut works too When using new feature, in the Notes section : spaces are replaced by underscores (not a problem, but just to let you know) Another question that might have to be set as a feature demand is actually about features: I have been massively using APE ( https://jorgensen.biology.utah.edu/wayned/ape/) that has this amazing feature tool that allows you to create feature libraries (that you can actually design using the app or directly using a CSV/txt file) to then automatically annotate the sequences you deal with. I don't know if that is already working on OVE or if it is planned somehow (I tried just now and didn't manage, but I most likely don't know how to do it...). Please let me know the best way to help in having this tool in OVE? Thanks a lot for fixing the saving issue (I'll try soon on linux manjaro) Take care Pablo Le lun. 26 avr. 2021 à 19:02, Thomas Rich ***@***.***> a écrit :

…

Hey @IbanezP <https://github.com/IbanezP> and @gmcarthuriv <https://github.com/gmcarthuriv> I've published a new version https://github.com/tnrich/ove-electron/releases/tag/v1.1.0 of ove-electron that should fix your issue. Let me know if it works for you. A few notes: - Unfortunately I am unable to publish a linux version of the tool to snapcraft due to snapcraft m1 incompatibilities ( https://forum.snapcraft.io/t/not-able-to-run-snapcraft-login-on-mac-m1/24001/3). I think the AppImage should still work for linux though? - I refactored how the main process and the renderer interact to adhere to new electron best practices. The code should be cleaner and more future proof now. - Due to changes in how I initialize the renderer process it's possible VERY large sequences wouldn't work with OVE electron but it is unclear to me whether there is a limit here or not ( https://stackoverflow.com/questions/38335004/how-to-pass-parameters-from-main-process-to-render-processes-in-electron/59347064#comment118661293_59347064 ) - I wasn't able to find an easy way to test native dialog interactions on electron and so have suspended the push to do so. I think it could be done by stubbing all the functionality of the native dialogs but it seems like a lot of effort to do it so I am holding off for now. - This release includes a native m1 version of the app (ARM mac download) and boy is it snapppppy! Cheers! — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#18 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AEVJV7MP3JTCYPM6N6IG5ITTKWMA7ANCNFSM42X5FUSA> .

--

-- Pablo M. IBÁÑEZ CRUCEYRA, PhD Postdoctoral Researcher Andrew D. GRIFFITHS Lab

________ +--------------------------+ | ESPCI ParisTech | +==========================+ | Laboratoire de Biochimie | +--------------------------+ bâtiment B 2ème étage porte B229 +------------------+ | 10 rue Vauquelin | +==================+ | 75005 Paris | +------------------+ | France | +------------------+ Office: +33 (0) 1 40 79 45 87NEW Mobile: +33 (0) 7 78 70 57 17Email: ***@***.***NEW Jitsi: https://meet.jit.si/PabloIbanezCruceyra________ École supérieure de physique et de chimie industrielles de la Ville de Paris 10, rue Vauquelin | 75231 Paris Cedex 05 | France + 33 1 40 79 44 00https://www.espci.psl.eu/en/ --

[tnrich]

@IbanezP sweet thanks for the report!

I think the best way to help a standalone auto annotation tool come to fruition would be to add a bunch of screenshots (and descriptions) detailing how this feature works in APE. You can add those onto this existing issue: #17

-Thomas

[IbanezP]

thanks done there #17 (comment) thanks again Le mar. 27 avr. 2021 à 00:01, Thomas Rich ***@***.***> a écrit :

…

@IbanezP <https://github.com/IbanezP> sweet thanks for the report! I think the best way to help a standalone auto annotation tool come to fruition would be to add a bunch of screenshots (and descriptions) detailing how this feature works in APE. You can add those onto this existing issue: #17 <#17> -Thomas — You are receiving this because you were mentioned. Reply to this email directly, view it on GitHub <#18 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AEVJV7NTPRL6T2JQLN7WVCDTKXPCVANCNFSM42X5FUSA> .

--

-- Pablo M. IBÁÑEZ CRUCEYRA, PhD Postdoctoral Researcher Andrew D. GRIFFITHS Lab

________ +--------------------------+ | ESPCI ParisTech | +==========================+ | Laboratoire de Biochimie | +--------------------------+ bâtiment B 2ème étage porte B229 +------------------+ | 10 rue Vauquelin | +==================+ | 75005 Paris | +------------------+ | France | +------------------+ Office: +33 (0) 1 40 79 45 87NEW Mobile: +33 (0) 7 78 70 57 17Email: ***@***.***NEW Jitsi: https://meet.jit.si/PabloIbanezCruceyra________ École supérieure de physique et de chimie industrielles de la Ville de Paris 10, rue Vauquelin | 75231 Paris Cedex 05 | France + 33 1 40 79 44 00https://www.espci.psl.eu/en/ --

[tnrich]

@IbanezP I'm going to close this. Please still let me know how the linux install goes. Also, thanks for updating the auto annotate issue with the APE functionality! I'll check that out

[gmcarthuriv]

Thanks, @tnrich - working well on my end.