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@StoreyLab

Storey Lab

Storey Lab at Princeton University

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  1. qvalue qvalue Public

    R package to estimate q-values and false discovery rate quantities.

    R 116 36

  2. edge edge Public

    R package for identifying differentially expressed genes from genome-wide gene expression profiling studies.

    R 21 9

  3. gcatest gcatest Public

    genotype conditional association test

    R 5 3

  4. lfa lfa Public

    logistic factor analysis

    R 16 8

  5. popkin popkin Public

    R package to estimate kinship and FST from SNP data

    R 20

  6. terastructure terastructure Public

    TeraStructure is a new algorithm to fit Bayesian models of genetic variation in human populations on tera-sample-sized data sets (10^12 observed genotypes, i.e., 1M individuals at 1M SNPs). This pa…

    C++ 49 10

Repositories

Showing 10 of 31 repositories
  • lfa Public

    logistic factor analysis

    StoreyLab/lfa’s past year of commit activity
    R 16 GPL-3.0 8 1 0 Updated Mar 31, 2025
  • gcatest Public

    genotype conditional association test

    StoreyLab/gcatest’s past year of commit activity
    R 5 GPL-3.0 3 0 0 Updated Mar 31, 2025
  • superadmixture Public

    R package superadmixture

    StoreyLab/superadmixture’s past year of commit activity
    R 1 GPL-3.0 0 0 0 Updated Feb 26, 2025
  • storeylab.github.io Public
    StoreyLab/storeylab.github.io’s past year of commit activity
    HTML 0 0 0 0 Updated Feb 26, 2025
  • superadmixture-manuscript-analysis Public

    Reproducible data analysis for "Coancestry superposed on admixed populations yields measures of relatedness at individual-level resolution" by Danfeng Chen and John D. Storey

    StoreyLab/superadmixture-manuscript-analysis’s past year of commit activity
    HTML 0 0 0 0 Updated Feb 26, 2025
  • causal-trio Public

    Reproducible data analysis for "Inferring causal genotype-phenotype relationships for population-sampled parent-child trios" by Tang, Cabreros, and Storey

    StoreyLab/causal-trio’s past year of commit activity
    HTML 2 MIT 0 0 0 Updated Jan 9, 2025
  • geneticTMT Public

    Transmission mean test (TMT) for genetic causal inference in families

    StoreyLab/geneticTMT’s past year of commit activity
    R 1 MIT 0 0 0 Updated Dec 10, 2024
  • popkin Public

    R package to estimate kinship and FST from SNP data

    StoreyLab/popkin’s past year of commit activity
    R 20 0 2 0 Updated Oct 2, 2024
  • qvalue Public

    R package to estimate q-values and false discovery rate quantities.

    StoreyLab/qvalue’s past year of commit activity
    R 116 36 5 2 Updated Sep 1, 2023
  • bnpsd Public

    R package to model and simulate admixed populations

    StoreyLab/bnpsd’s past year of commit activity
    R 8 GPL-3.0 0 0 0 Updated Jul 21, 2023
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