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Merge remote-tracking branch 'origin/master'
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goedman committed Feb 8, 2023
2 parents a2b2386 + 72f0dc7 commit f97ec89
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20 changes: 10 additions & 10 deletions .github/workflows/CI.yml
Original file line number Diff line number Diff line change
Expand Up @@ -7,7 +7,7 @@ on:
pull_request:

env:
JULIA_CMDSTAN_HOME: "/home/worker/cmdstan-2.28.2/"
JULIA_CMDSTAN_HOME: "/home/worker/cmdstan-2.31.0/"

jobs:
test:
Expand Down Expand Up @@ -41,18 +41,18 @@ jobs:
OLDWD=`pwd`
cd ~
pwd
wget https://github.com/stan-dev/cmdstan/releases/download/v2.28.2/cmdstan-2.28.2.tar.gz
tar -xzpf cmdstan-2.28.2.tar.gz
wget https://github.com/stan-dev/cmdstan/releases/download/v2.31.0/cmdstan-2.31.0.tar.gz
tar -xzpf cmdstan-2.31.0.tar.gz
ls -lia .
ls -lia ./cmdstan-2.28.2
ls -lia ./cmdstan-2.28.2/make
touch ./cmdstan-2.28.2/make/local
echo "STAN_THREADS=true" > ./cmdstan-2.28.2/make/local
cat ./cmdstan-2.28.2/make/local
ls -lia ./cmdstan-2.31.0
ls -lia ./cmdstan-2.31.0/make
touch ./cmdstan-2.31.0/make/local
echo "STAN_THREADS=true" > ./cmdstan-2.31.0/make/local
cat ./cmdstan-2.31.0/make/local
make -C $JULIA_CMDSTAN_HOME build
cd $OLDWD
env:
JULIA_CMDSTAN_HOME: "/home/runner/cmdstan-2.28.2/"
JULIA_CMDSTAN_HOME: "/home/runner/cmdstan-2.31.0/"
- uses: actions/checkout@v2
- uses: julia-actions/setup-julia@v1
with:
Expand All @@ -71,7 +71,7 @@ jobs:
- uses: julia-actions/julia-buildpkg@latest
- uses: julia-actions/julia-runtest@latest
env:
JULIA_CMDSTAN_HOME: "/home/runner/cmdstan-2.28.2/"
JULIA_CMDSTAN_HOME: "/home/runner/cmdstan-2.31.0/"
- uses: julia-actions/julia-processcoverage@v1
if: matrix.version == '1' && matrix.os == 'ubuntu-latest' && matrix.num_threads == 1
- uses: codecov/codecov-action@v1
Expand Down
13 changes: 9 additions & 4 deletions Project.toml
Original file line number Diff line number Diff line change
Expand Up @@ -10,19 +10,24 @@ Distributions = "31c24e10-a181-5473-b8eb-7969acd0382f"
JSON = "682c06a0-de6a-54ab-a142-c8b1cf79cde6"
Printf = "de0858da-6303-5e67-8744-51eddeeeb8d7"
Random = "9a3f8284-a2c9-5f02-9a11-845980a1fd5c"
StanSample = "c1514b29-d3a0-5178-b312-660c88baa699"
#StanSample = "c1514b29-d3a0-5178-b312-660c88baa699"
Statistics = "10745b16-79ce-11e8-11f9-7d13ad32a3b2"
StatsFuns = "4c63d2b9-4356-54db-8cca-17b64c39e42c"
#StatsPlots = "f3b207a7-027a-5e70-b257-86293d7955fd"
StatsPlots = "f3b207a7-027a-5e70-b257-86293d7955fd"
Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

[compat]
CSV = "0.10"
DataFrames = "1.4"
Distributions = "0.25"
JSON = "0.21"
StanSample = "6, 7"
#StanSample = "7"
StatsFuns = "1.0"
StatsPlots = "0.15"
julia = "1"

[extras]
StanSample = "c1514b29-d3a0-5178-b312-660c88baa699"
Test = "8dfed614-e22c-5e08-85e1-65c5234f0b40"

[targets]
test = ["StanSample", "Test"]

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