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add conditional bass
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Jieran-S committed Feb 26, 2024
1 parent 3358542 commit 274785d
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4 changes: 4 additions & 0 deletions method/bass/bass.r
Original file line number Diff line number Diff line change
Expand Up @@ -170,6 +170,10 @@ scaleFeature <- config$scaleFeature
nPC <- config$nPC
nSE <- config$nSE

if (!exists("matrix_file")) {
matrix_file <- NA
}

# SpatialExperiment
spe <- get_SpatialExperiment(
feature_file = feature_file,
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