Popular repositories Loading

1. getLCA getLCA Public

   Forked from frederikseersholm/getLCA

   Python 1

2. metagenomics-1 metagenomics-1 Public

   Collection of python scripts used in the analysis of long and short read metagenomic data. Includes scripts for taxonomic analysis as well functional annotation of WGS and proteomic data

   Python 1

3. blast_getLCA blast_getLCA Public

   Forked from frederikseersholm/blast_getLCA

   Python script to parse blast files and assign each read to the taxonomic of the lowest common ancestor

   Python

4. prepare-KEGG-for-humann2 prepare-KEGG-for-humann2 Public

   Forked from RCPCM-GCB/prepare-KEGG-for-humann2

   Jupyter Notebook

5. humann humann Public

   Forked from biobakery/humann

   HUMAnN 2.0 is the next generation of HUMAnN 1.0 (HMP Unified Metabolic Analysis Network).

   Python

6. flextaxd flextaxd Public

   Forked from FOI-Bioinformatics/flextaxd

   FlexTaxD (Flexible Taxonomy Databases) - Create, add, merge different taxonomy sources (QIIME, GTDB, NCBI and more) and create metagenomic databases (kraken2, ganon and more )

   Python