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Feature/refactor api model #868

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emrgnt-cmplxty
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@emrgnt-cmplxty emrgnt-cmplxty commented Aug 14, 2024

🚀 This description was created by Ellipsis for commit 76bdbb5

Summary:

Refactored API model by reorganizing imports, renaming directories, and updating class and function references to improve code structure and maintainability.

Key points:

  • Renamed r2r/agents to r2r/agent and updated imports accordingly.
  • Refactored r2r/__init__.py to include new abstractions and providers.
  • Updated r2r/base/__init__.py to import from new module structure.
  • Introduced r2r/base/abstractions/__init__.py for abstraction imports.
  • Moved Tool, ToolResult, and Message classes to r2r/base/agent/base.py.
  • Refactored r2r/base/api/models to organize request and response models.
  • Updated logging configuration in r2r/base/logging/run_logger.py.
  • Refactored r2r/base/pipeline and r2r/base/pipes for better modularity.
  • Updated r2r/base/providers to include new provider configurations.
  • Refactored r2r/main to align with new module structure.
  • Updated test cases in tests/test_client.py and tests/test_groups.py to reflect refactor changes.

Generated with ❤️ by ellipsis.dev

@emrgnt-cmplxty emrgnt-cmplxty marked this pull request as ready for review August 14, 2024 18:52
@emrgnt-cmplxty emrgnt-cmplxty merged commit 086cecb into feature/add-group-permissioning Aug 14, 2024
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👍 Looks good to me! Reviewed everything up to 76bdbb5 in 1 minute and 58 seconds

More details
  • Looked at 2155 lines of code in 51 files
  • Skipped 0 files when reviewing.
  • Skipped posting 1 drafted comments based on config settings.
1. r2r/__init__.py:2
  • Draft comment:
    The PR introduces a significant refactor of the API model, including changes to the structure of imports, the addition of new classes, and the reorganization of modules. The changes are extensive and touch on various aspects of the system, including logging, API requests and responses, and the initialization of components.

The PR seems to be well-organized, with changes logically grouped and related functionalities kept together. This should help maintainability and understandability of the codebase. However, given the breadth of changes, it's crucial to ensure that all dependencies and interactions between components are correctly handled to avoid introducing bugs.

One potential issue could be the renaming and reorganization of imports which might lead to hidden bugs if not all references were correctly updated. It's also important to ensure that the new configurations and initializations are compatible with existing systems and that they don't introduce breaking changes unless absolutely necessary.

  • Reason this comment was not posted:
    Confidence of 0% on close inspection, compared to threshold of 50%.

Workflow ID: wflow_GqyKx6bTFtWDhAVy


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NolanTrem added a commit that referenced this pull request Aug 16, 2024
* add group ids to document abstraction, first steps

* extend group permissions

* up

* add tests for new group features

* up

* fixup auth

* onboard extensive regression tests

* adding regression tests

* finish tests

* rm selenium

* test observability

* uncomment tests

* checkin first set of group tests

* modify search, passing vector tests

* checkin work

* full delete logic

* update search to use new filters

* check in

* Clean up

* Check in

* add search

* tests/test_end_to_end.py::test_ingest_txt_document passing

* cleanup logging

* make schemas explicit

* move to run logger abstraction

* cleanup some test workflows

* revive tests

* tweak to pass tests

* tweak rrf

* finish hybrid search cleanup

* fixup on regr tests, regen payloads

* refresh payloads

* refactor api model

* Feature/refactor api model (#868)

* cleanup imports

* flake and cleanup

* coherent global import / export structure

* add ingestion response models

* add management response models

* cleanups

* checkin work on routes

* remove request models

* last fixes

* merge

* add user / group gating

* working test groups

* updating client

---------

Co-authored-by: NolanTrem <34580718+NolanTrem@users.noreply.github.com>
emrgnt-cmplxty added a commit that referenced this pull request Aug 17, 2024
* add group ids to document abstraction, first steps

* extend group permissions

* up

* add tests for new group features

* up

* fixup auth

* onboard extensive regression tests

* adding regression tests

* finish tests

* rm selenium

* test observability

* uncomment tests

* checkin first set of group tests

* modify search, passing vector tests

* checkin work

* full delete logic

* update search to use new filters

* check in

* Clean up

* Check in

* add search

* tests/test_end_to_end.py::test_ingest_txt_document passing

* cleanup logging

* make schemas explicit

* move to run logger abstraction

* cleanup some test workflows

* revive tests

* tweak to pass tests

* tweak rrf

* finish hybrid search cleanup

* fixup on regr tests, regen payloads

* refresh payloads

* refactor api model

* Feature/refactor api model (#868)

* cleanup imports

* flake and cleanup

* coherent global import / export structure

* add ingestion response models

* add management response models

* cleanups

* checkin work on routes

* remove request models

* last fixes

* merge

* add user / group gating

* working test groups

* updating client

* rename service to restructure

* add get documents for group endpoint

* fix client bugs

* return delete format

* merge cleanups

* merge

* finalize

---------

Co-authored-by: NolanTrem <34580718+NolanTrem@users.noreply.github.com>
emrgnt-cmplxty added a commit that referenced this pull request Aug 18, 2024
* add group ids to document abstraction, first steps

* extend group permissions

* up

* add tests for new group features

* up

* fixup auth

* onboard extensive regression tests

* adding regression tests

* finish tests

* rm selenium

* test observability

* uncomment tests

* checkin first set of group tests

* modify search, passing vector tests

* checkin work

* full delete logic

* update search to use new filters

* check in

* Clean up

* Check in

* add search

* tests/test_end_to_end.py::test_ingest_txt_document passing

* cleanup logging

* make schemas explicit

* move to run logger abstraction

* cleanup some test workflows

* revive tests

* tweak to pass tests

* tweak rrf

* finish hybrid search cleanup

* fixup on regr tests, regen payloads

* refresh payloads

* refactor api model

* Feature/refactor api model (#868)

* cleanup imports

* flake and cleanup

* coherent global import / export structure

* add ingestion response models

* add management response models

* cleanups

* checkin work on routes

* remove request models

* last fixes

* merge

* add user / group gating

* sync

* enrich

* up

* fix global search

* rag

* remove client.py

* rm configs

* rm configs

---------

Co-authored-by: emrgnt-cmplxty <owen@algofi.org>
Co-authored-by: NolanTrem <34580718+NolanTrem@users.noreply.github.com>
Co-authored-by: emrgnt-cmplxty <68796651+emrgnt-cmplxty@users.noreply.github.com>
emrgnt-cmplxty added a commit that referenced this pull request Aug 23, 2024
* Feature/merge graphrag group mgmt (#876)

* add group ids to document abstraction, first steps

* extend group permissions

* up

* add tests for new group features

* up

* fixup auth

* onboard extensive regression tests

* adding regression tests

* finish tests

* rm selenium

* test observability

* uncomment tests

* checkin first set of group tests

* modify search, passing vector tests

* checkin work

* full delete logic

* update search to use new filters

* check in

* Clean up

* Check in

* add search

* tests/test_end_to_end.py::test_ingest_txt_document passing

* cleanup logging

* make schemas explicit

* move to run logger abstraction

* cleanup some test workflows

* revive tests

* tweak to pass tests

* tweak rrf

* finish hybrid search cleanup

* fixup on regr tests, regen payloads

* refresh payloads

* refactor api model

* Feature/refactor api model (#868)

* cleanup imports

* flake and cleanup

* coherent global import / export structure

* add ingestion response models

* add management response models

* cleanups

* checkin work on routes

* remove request models

* last fixes

* merge

* add user / group gating

* working test groups

* updating client

---------

Co-authored-by: NolanTrem <34580718+NolanTrem@users.noreply.github.com>

* Clean up API (#878)

* Get running

* fixes in sdk

* Add in more fixes

* Feature/merge dev owen changes (#880)

* add group ids to document abstraction, first steps

* extend group permissions

* up

* add tests for new group features

* up

* fixup auth

* onboard extensive regression tests

* adding regression tests

* finish tests

* rm selenium

* test observability

* uncomment tests

* checkin first set of group tests

* modify search, passing vector tests

* checkin work

* full delete logic

* update search to use new filters

* check in

* Clean up

* Check in

* add search

* tests/test_end_to_end.py::test_ingest_txt_document passing

* cleanup logging

* make schemas explicit

* move to run logger abstraction

* cleanup some test workflows

* revive tests

* tweak to pass tests

* tweak rrf

* finish hybrid search cleanup

* fixup on regr tests, regen payloads

* refresh payloads

* refactor api model

* Feature/refactor api model (#868)

* cleanup imports

* flake and cleanup

* coherent global import / export structure

* add ingestion response models

* add management response models

* cleanups

* checkin work on routes

* remove request models

* last fixes

* merge

* add user / group gating

* working test groups

* updating client

* rename service to restructure

* add get documents for group endpoint

* fix client bugs

* return delete format

* merge cleanups

* merge

* finalize

---------

Co-authored-by: NolanTrem <34580718+NolanTrem@users.noreply.github.com>

* Shreyas/graphrag test (#881)

* add group ids to document abstraction, first steps

* extend group permissions

* up

* add tests for new group features

* up

* fixup auth

* onboard extensive regression tests

* adding regression tests

* finish tests

* rm selenium

* test observability

* uncomment tests

* checkin first set of group tests

* modify search, passing vector tests

* checkin work

* full delete logic

* update search to use new filters

* check in

* Clean up

* Check in

* add search

* tests/test_end_to_end.py::test_ingest_txt_document passing

* cleanup logging

* make schemas explicit

* move to run logger abstraction

* cleanup some test workflows

* revive tests

* tweak to pass tests

* tweak rrf

* finish hybrid search cleanup

* fixup on regr tests, regen payloads

* refresh payloads

* refactor api model

* Feature/refactor api model (#868)

* cleanup imports

* flake and cleanup

* coherent global import / export structure

* add ingestion response models

* add management response models

* cleanups

* checkin work on routes

* remove request models

* last fixes

* merge

* add user / group gating

* sync

* enrich

* up

* fix global search

* rag

* remove client.py

* rm configs

* rm configs

---------

Co-authored-by: emrgnt-cmplxty <owen@algofi.org>
Co-authored-by: NolanTrem <34580718+NolanTrem@users.noreply.github.com>
Co-authored-by: emrgnt-cmplxty <68796651+emrgnt-cmplxty@users.noreply.github.com>

* Feature/fix embedding pipe (#882)

* up

* fixup concurrency

* fix ollama embeddings

* fix batching with ollama

* checkin all cleanups

* rm kg cruft (#884)

* rm kg cruft

* tweaks

* tweak 2 (#885)

* Feature/fix retrieval endpoint cruft (#887)

* tweak 2

* fix retrieval endpoint descriptions

* Python SDK (#886)

Clean up Python SDK and routes

* Separate out SDK, add js and go sdk to monorepo (#888)

* Add r2r-js sdk

* Add go sdk

* Pull out python sdk

* remove venv

* Update packages

* Check in fixes

* Remove alembic dependencies

* Feature/merge w nolan (#894)

* cleanup hybrid search

* cleanups in

* Fix structure

* Make graspologic optional

* fix rag stream (#895)

* add py r2r (#896)

* Clean up (#897)

* fix agent (#898)

* define `RAGAgentResponse` (#899)

* Shreyas/unstructured (#900)

* api + oss lib

* rm pdb

* rm poetry lock

* update version

* fixes

* Feature/cleanup client obj logic (#901)

* define `RAGAgentResponse`

* cleanup client logic

* Shreyas/tests (#889)

* init

* tests

* rename service

* api model

* add

* merge

* rm restructure router

* print descriptions

* Refactor CLI (#903)

* Rm files readded by git (#904)

* Remove Execution Wrapper (#905)

* Rm files readded by git

* Fix merge botch

* Feature/fix auth revive tests rebased (#906)

* adding the client touch ups

* fix auth, revive tests

* add back tests

* uncomment run auth workflow

* decruft

* refresh test kg

* fixup toml (#908)

* Feature/fix ingestion update (#909)

* fixup toml

* fix update

* Fix CLI Tests (#912)

Fix CLI tests

* Shreyas/kg runtime cfg (#913)

add kg runtime config

* rename kgenrichmentresponse (#914)

* Feature/add nltk hybrid expansion rebased (#917)

* expand hybrid search with nltk

* cleanups

* cleanup hybrid search

* format

* add setup.py

* update

* add script (#918)

* Fix bug in document chunks (#921)

* Fix bug in update files (#923)

* Shreyas/unstructured (#922)

* fix dockerfiles

* adding config

* fix paths

* mv unstructured dep to docker

* clean

* Update docker_utils.py

* Update unstructured_parsing.py

* Update r2r_chunking.py

* Update app_entry.py

* Feature/repair logging (#925)

* fixing logs

* fix

* rm double logging (#929)

* Configs (#926)

* Fix config logic

* Update config

* Clean up cli entry point

* Disable SSL when installing nltk wordnet (#930)

* Fix analytics endpoint

* Update OpenAI sdk calls (#933)

* Feature/revive advanced rag (#932)

* rm double logging

* revive advanced rag examples

* merge (#934)

* sync model (#935)

* Feature/remove version from ingestion end pt (#936)

* sync model

* remove ability to set version

* tweak versions impl

* fix version bug

* Move docker (#938)

* Move docker

* remove from root

* Clean up sdk/restructure.py

* Fix js tests, completion scoring (#939)

* Shreyas/unstructured docker image (#940)

unstructured docker image

* Update JS (#941)

* Update models (#942)

* Feature/complete group logic (#945)

* fix group logic

* up

* Fix Dockerbuild, Symlink Readme (#944)

* Add back tast prompt override and include title if availible

* Fix docker, sym link readme

* Fix compose file path

* Shreyas/KG Search Result model (#937)

* return type to kg_search_result

* add model

* local and global results

* modify config

* refresh should not be gated by auth (#946)

* Linting sync (#947)

* Remove email from refresh (#948)

* Fix link to image

* Feature/rm print cruft rebase (#953)

* refresh should not be gated by auth

* rm print cruft

* black and sort

* merge

* rm

* update api return type

* Update Actions (#954)

* Update Github Actions (#956)

* Update Actions

* Update actions

* Shreyas/kgsearchresult model (#957)

* return type to kg_search_result

* add model

* local and global results

* modify config

* add models

* up

* fix config path

* fix models

* Login and refresh token bug (#959)

* Update Actions

* Fix bug in login with refresh token

* Point pytest to linux (#960)

* collection docs (#955)

* Feature/merge dev to main (#962)

* merge dev and main

* git rm

* add back collection fix

* fix docker builds (#963)

* Running unstructured docker + code cleanups (#964)

* Small bugfixes on prompts, return types (#965)

* Fix failing CLI tests

* NPM publish action

* remove tarball

* Feature/fix dev tests (#966)

* update auth tests

* fix tests

* back and sort

* decruft

* revert back to gpt-4o

---------

Co-authored-by: NolanTrem <34580718+NolanTrem@users.noreply.github.com>
Co-authored-by: Shreyas Pimpalgaonkar <shreyas.gp.7@gmail.com>
@emrgnt-cmplxty emrgnt-cmplxty deleted the feature/refactor-api-model branch August 26, 2024 20:15
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